Gene
| Gene Model ID | pfu_aug1.0_5765.1_45291 |
|---|---|
| Locus | scaffold5765.1 : 34377 ... 37435 : - |
| To GenomeBrowser | scaffold5765.1:34377..37435 |
| Genes list of scaffold | scaffold5765.1 |
| Synonym | pfu_aug2.0_335.1_17302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5765.1_45291.t1 | 1 | 1 | zf-CCHC | 348 | 364 | 6.6e-07 | 28.9 | 2.2e-10 | 1.6e-06 | 27.7 |
| pfu_aug1.0_5765.1_45291.t1 | 1 | 1 | RVT_1 | 557 | 716 | 2.5e-19 | 69.4 | 6.6e-23 | 4.9e-19 | 68.5 |
Transcript
| Transcript ID | pfu_aug1.0_5765.1_45291.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5765.1_45291.t1 atgcacacaacgaaaagtcgtacgccaggaatggagggatcgtatttggggactccgagctatgatgatgatagatcaac gccaggagcaaagtcagtgccagtcatactaaagagaacgccagaagttaaagtgaagatacatgccagtgatgttattt cggcaacacacgatgcaccgcacacaccaacaacaacagcgacgccatataaacaatcaatagaagatctacagggcaca ttggtgacaaccttagacggatttttgcgtttgcaggaagatgtaaacaggatgagagatcaaaactctgacatgaaact cgccagcagcagaaagatagcaggtggcgcagatgctgtagtagatccagataatattatatctaggaacaaagatgcag ataagctaaagaaggttgcaaaagctgacaatgaccataaggcacagccagtcaaacgcacagccgatgactttcgcaga ccgaagataacaccatctacattcgatggaacaacgccatgtaatgacaagaaggcagattacaaggaactggtaatcgc actagagaaacgattcgcaccgccaaacattgaagaactctataaagctgagctgaggatgcgacagagaaagcaagcag aatcactgttagaattaggacaagctgtaagacgattagtgacactggcatacccaaacgtaccagaagaagttctcgac acgttgtcaaaagatagccttctcaattctctgaatgacgccgaagtacgcctaaaggttctccgagctagaccgacaaa cttcgatgaaacgttgcagattgctgtagaacttgatgcatttatgagagcagaagaaaagcgagcatcaaagtcgcatt acaaaattgtaagaggagtagagtcgagcgatgatagaacagccgaaatcgataagctaaaatcagaattgcagcatctg aaggaactgatgcataagcagattctgagaggcagacgaggaaatcgaggaagaggcaaacccttggacagaaatgacat tatttgctacaactgcaatcagaaaggacatatgagtcgtaagtgtccacagtcaaaggagcagaagaaaaaccnttttg agcaagatatgcaatgctgcagagtgtctgttgaggagacttccgtcattccagctcacagcgaacgcataaatacaggg caaatgatcgctagtaactgcggtgccggtgaatcagtgccaatacgactaatgaaattaagtgatgatccgaaagtaat atataaaggaaccgttccaggattgttcgagccgattagtactgtcatgccgcggaggagttctccgtctacaggaagac agacacagcctgatcatatacaaacgttactagacaatgcagaggacttgaccccaaaacagaggcaggatgcgcacgca ttttttctgacgcacgcaaagctgtttgcagagagaggtgtagaacatggtcatacaaagctgataaagcatacaatcga cacaggaagtgaaaagccgataagacagcagcctcgacgagtaccataccagctgaaaaaggaaatcgatacgcagatag acagtatgttggcgaacaagataattaggccttcatcgagtccttgggccagtcctattgtgttagctcgtaagaaggat ggatcattacgattctgcatcgactttagaaagttaaacgccgtgacgataaaggatgcttatcctttaccaaggataga cgattcgttagacgcactcggaggttcaagatggttctcaactcttgatatgatgtgtggatattggcaggtagaagtag ccgaaacggttaaacagaaaactgcattcacatctcacagaggattgttcgagttcaatgtaatgccgtttggactgtgc aacgccgccggaacatttgaacgtttaatgcagacagtgtgcgcaggccttagatggaacatttgcttaatatatctgga cgatataattgtcttcagttcaacatttgaggaacatttggaaagacttgatgtgattttcaaacgactttatgacgcag gattgaggctcagaagcaaaaagtgtagtctctttaagcacagggtatcgtaccttgggcatataattactgagaagggc gtcgagacggatccggagaaaataaactgtattaaagattggcctacaccgacaaacgttgcagacttacgcattttcct tggtctatgctcgtactacagacggtttgtgaaaggatttgctaagatagagagtcccttacatagtctaacgcagaagg ataagcagtacaactggaccacagattgcgagaacgcttttcaagacatggagaaagcactcgtaaacgcacctattcta gtgatgcccgatttctcaaagacatttatactagatactgacgcatccgaccgaggtattggagcagtgctgagtcaagt aatcgagagtaaagagaaagtatgtaatatcatatggcagcaggtcattgacaaagtcagagaagaaatacagcattaca aggaaggaactgttagcagtagtacacgtcattaa |
|
Protein
| Protein ID | pfu_aug1.0_5765.1_45291.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5765.1_45291.t1 MHTTKSRTPGMEGSYLGTPSYDDDRSTPGAKSVPVILKRTPEVKVKIHASDVISATHDAPHTPTTTATPYKQSIEDLQGT LVTTLDGFLRLQEDVNRMRDQNSDMKLASSRKIAGGADAVVDPDNIISRNKDADKLKKVAKADNDHKAQPVKRTADDFRR PKITPSTFDGTTPCNDKKADYKELVIALEKRFAPPNIEELYKAELRMRQRKQAESLLELGQAVRRLVTLAYPNVPEEVLD TLSKDSLLNSLNDAEVRLKVLRARPTNFDETLQIAVELDAFMRAEEKRASKSHYKIVRGVESSDDRTAEIDKLKSELQHL KELMHKQILRGRRGNRGRGKPLDRNDIICYNCNQKGHMSRKCPQSKEQKKNXFEQDMQCCRVSVEETSVIPAHSERINTG QMIASNCGAGESVPIRLMKLSDDPKVIYKGTVPGLFEPISTVMPRRSSPSTGRQTQPDHIQTLLDNAEDLTPKQRQDAHA FFLTHAKLFAERGVEHGHTKLIKHTIDTGSEKPIRQQPRRVPYQLKKEIDTQIDSMLANKIIRPSSSPWASPIVLARKKD GSLRFCIDFRKLNAVTIKDAYPLPRIDDSLDALGGSRWFSTLDMMCGYWQVEVAETVKQKTAFTSHRGLFEFNVMPFGLC NAAGTFERLMQTVCAGLRWNICLIYLDDIIVFSSTFEEHLERLDVIFKRLYDAGLRLRSKKCSLFKHRVSYLGHIITEKG VETDPEKINCIKDWPTPTNVADLRIFLGLCSYYRRFVKGFAKIESPLHSLTQKDKQYNWTTDCENAFQDMEKALVNAPIL VMPDFSKTFILDTDASDRGIGAVLSQVIESKEKVCNIIWQQVIDKVREEIQHYKEGTVSSSTRH |
|