Gene
| Gene Model ID | pfu_aug1.0_5765.1_45293 |
|---|---|
| Locus | scaffold5765.1 : 46500 ... 54936 : - |
| To GenomeBrowser | scaffold5765.1:46500..54936 |
| Genes list of scaffold | scaffold5765.1 |
| Synonym | pfu_aug2.0_1140.1_01419 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5765.1_45293.t1 | 2 | 1 | ATP-synt_C | 1 | 44 | 1.6e-22 | 79.1 | 1.1e-13 | 1.7e-09 | 37.4 |
| pfu_aug1.0_5765.1_45293.t1 | 2 | 2 | ATP-synt_C | 71 | 130 | 1.6e-22 | 79.1 | 6.3e-17 | 9.3e-13 | 47.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5765.1_45293.t1 | gi|196008965|ref|XP_002114348.1| | expressed hypothetical protein [Trichoplax adhaerens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 2 |
Transcript
| Transcript ID | pfu_aug1.0_5765.1_45293.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5765.1_45293.t1 gggtattttcatcagtggatcaagtatacttggtggtggagtgaaagccccgagaatcagaacaaagaatctgatcagca tcatcttctgtgaggctgtggctatatttggcatcattatggcaatcatcatcggtaacaacatcgggtcatataatcca gatacggccagtgaaacaataataagggatagctacaatgcagggtaccgtatgtttgctgccggactgactgtgggtgt gtctaatattgcttgtggattgtgtataggtgtggttggatcaggggcagctttagccgacgcccaaaactcctctctct ttgtaaaaatcttaattatagaaatctttggcagtgccattggactatttggagttatcattggcattcttcaggtatct gacgtcaacgcattgtga |
|
Protein
| Protein ID | pfu_aug1.0_5765.1_45293.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5765.1_45293.t1 GIFISGSSILGGGVKAPRIRTKNLISIIFCEAVAIFGIIMAIIIGNNIGSYNPDTASETIIRDSYNAGYRMFAAGLTVGV SNIACGLCIGVVGSGAALADAQNSSLFVKILIIEIFGSAIGLFGVIIGILQVSDVNAL |
|