Gene
| Gene Model ID | pfu_aug1.0_5788.1_31044 |
|---|---|
| Locus | scaffold5788.1 : 467 ... 5385 : - |
| To GenomeBrowser | scaffold5788.1:467..5385 |
| Genes list of scaffold | scaffold5788.1 |
| Synonym | pfu_aug2.0_984.1_14699 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5788.1_31044.t1 | 2 | 1 | 7TM_GPCR_Srsx | 74 | 332 | 3.3e-09 | 36.2 | 2.7e-12 | 6.6e-09 | 35.3 |
| pfu_aug1.0_5788.1_31044.t1 | 1 | 1 | 7tm_1 | 79 | 373 | 0.0 | 158.8 | 0.0 | 1.4013e-45 | 155.4 |
| pfu_aug1.0_5788.1_31044.t1 | 2 | 1 | 7TM_GPCR_Srv | 81 | 303 | 7.4e-08 | 31.8 | 3.0e-11 | 7.4e-08 | 31.8 |
| pfu_aug1.0_5788.1_31044.t1 | 2 | 2 | 7TM_GPCR_Srv | 331 | 390 | 7.4e-08 | 31.8 | 0.12 | 290.0 | 0.3 |
| pfu_aug1.0_5788.1_31044.t1 | 2 | 2 | 7TM_GPCR_Srsx | 345 | 387 | 3.3e-09 | 36.2 | 0.0068 | 17.0 | 4.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5788.1_31044.t1 | gi|307169243|gb|EFN62034.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5788.1_31044.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5788.1_31044.t1 atggaacgttaccgcaataccacttctttaattggaatgaatctatggatgcctataatgcgtggaataaatacttcaaa atttcatattgatatgaattcttcagagcatcacatgcagaattactcggaaattgaagacctgttgctccatatgggcc aaaagcgtcgtgatatggtctctactaccattttacttctggtttattctttgatattttttaccgggaccgtaggaaat atctgcacctgtatcgtgatcgtgaagaacaaatacatgcacactgctaccaacttttatctattcagtttagcgatttc ggatgttttaatccttctttttggtttaccgtttgaagcatactcaatatgggaagcctatccatatcgcttcggagaat ttttctgcattttcaaagctttcttgacagaaactacgtcatacgcctccataatcacgatcacagcatttacaatagag cgttacatcgctatatgtttcccgctaaaatctcacagaatcacggacctgagacgctctgcaaaaatcatcatgttcat ctgggcgtttgcagctgcttgtgctttgccttatccaatacatacacgaacgttttattttcttatcaatccggagacag ataaacctgtaaaagattcatttatgtgcaatattcctaaacactggcattctcgcatgagatacatgttccaagtatct actttcattttctttgttttgccaatgactgtgattatcgttttatacgttttgattgtcattgctcttcgaaaaactac ccttgtcagagcaaattcggaagattcaacgaaaagtcatagccataaccattccatgagaaccgtcatcagaatgctat tcgccgttgtggtagcgttcttcttatgctgggcaccgttccatgttcaaagactttatacattatatgaaaacgattgg acagaatattctttggagattcaaagtcacctattctatgtttcagataaaggaactcttcattgcaaactgaatgataa accgagtttatattgtaatttcttttgcatttcaggagttttgtatttcgtgagctcaacagtgaatccaattctctata atgtaatgtctagacgttacagacaagcattcaaagaaactatattttgttgttttgccaaacgtatgacgaaatatgag aggagtctcttaaattatcatagtatgcgatcagcgtcttgctacagaggttacaggcgcaaaacgactcccgagtacca attgacacatatcgaacactctagtttccacgatggttacttgtcacgcaacattgccgatgagatccagagcagtccag cagctataaagcttcttgccaaaagagagacaagggctgttcagttcgttaatggacacttacaacaacaagattatatc gaatccagtcaaccgcttactacctcaattttaaatcaagaattaaaacaaaatggtctttctaatacatag |
|
Protein
| Protein ID | pfu_aug1.0_5788.1_31044.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5788.1_31044.t1 MERYRNTTSLIGMNLWMPIMRGINTSKFHIDMNSSEHHMQNYSEIEDLLLHMGQKRRDMVSTTILLLVYSLIFFTGTVGN ICTCIVIVKNKYMHTATNFYLFSLAISDVLILLFGLPFEAYSIWEAYPYRFGEFFCIFKAFLTETTSYASIITITAFTIE RYIAICFPLKSHRITDLRRSAKIIMFIWAFAAACALPYPIHTRTFYFLINPETDKPVKDSFMCNIPKHWHSRMRYMFQVS TFIFFVLPMTVIIVLYVLIVIALRKTTLVRANSEDSTKSHSHNHSMRTVIRMLFAVVVAFFLCWAPFHVQRLYTLYENDW TEYSLEIQSHLFYVSDKGTLHCKLNDKPSLYCNFFCISGVLYFVSSTVNPILYNVMSRRYRQAFKETIFCCFAKRMTKYE RSLLNYHSMRSASCYRGYRRKTTPEYQLTHIEHSSFHDGYLSRNIADEIQSSPAAIKLLAKRETRAVQFVNGHLQQQDYI ESSQPLTTSILNQELKQNGLSNT |
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