Gene
| Gene Model ID | pfu_aug1.0_5795.1_16774 |
|---|---|
| Locus | scaffold5795.1 : 15597 ... 23135 : - |
| To GenomeBrowser | scaffold5795.1:15597..23135 |
| Genes list of scaffold | scaffold5795.1 |
| Synonym | pfu_aug2.0_35.1_16754 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5795.1_16774.t1 | 2 | 1 | Y_phosphatase | 20 | 36 | 0.0 | 208.1 | 0.0029 | 42.0 | 3.3 |
| pfu_aug1.0_5795.1_16774.t1 | 2 | 2 | Y_phosphatase | 97 | 331 | 0.0 | 208.1 | 0.0 | 0.0 | 203.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5795.1_16774.t1 | gi|32456|emb|CAA41226.1| | protein-tyrosine phosphatase [Homo sapiens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5795.1_16774.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5795.1_16774.t1 atgaacagaaaaacgacacgtgttatcgacaaccacaacaaaagtgaatgtcatagacaagtccgggaaaaagaacagta catatttgtatatgacgtgctgttggaggccctgatttgcggggagacaaccgtgtcagtagacgcttacagggatatcc tggatgacttactacagtacgaccaaagtatagccaaaacaaaaatagaggaacaatatgaggttttgaatctaataacg tccataatagagcgggatgagacaacgacgggactacgccctgaaaatgtcttcaaaaacagaaacaaaacaattgtacc tgcaaacagatgccgaccatatctgataacacccgtggaagattacaacaactatatcaacgctgtatttctggatagtt tccggcggaaggacgcttacatcattacccagatgccacttccgctgacagctgtagatttctggcggctaatttatgac cacaattcatactgtattgtcatgctgaacgaagtagacaaagctgacgagacttgtgtagcatactggacgctggacac atgtggagagagcttcggtccattcatagtagagaccacagcagaaatcaaatcagaccccagtgttactgtcagggact tcactatcacaaatacactcaatcctcaggaaatgccacgagttgtccgtcagtttaacttccaccgttggacagagggc agtgcagtccccagctctaaggcggctctcctggagttactagacaacgtgggtaaatggcagggtcagagtggaaacaa gcctgtcacagtccactgcctggatggagcagcaaagagcggtctgttcgtagcctccagttgtatattagagagagtca agacggagaaagaggtggatgtcttccaaaccatcaaacagatgagactgaatagaccacaactcatagatagcttggaa caattcaagttttgtcatgaaattgccttggaatttttgaactcttcttcacaacccaatggcgcctcctga |
|
Protein
| Protein ID | pfu_aug1.0_5795.1_16774.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5795.1_16774.t1 MNRKTTRVIDNHNKSECHRQVREKEQYIFVYDVLLEALICGETTVSVDAYRDILDDLLQYDQSIAKTKIEEQYEVLNLIT SIIERDETTTGLRPENVFKNRNKTIVPANRCRPYLITPVEDYNNYINAVFLDSFRRKDAYIITQMPLPLTAVDFWRLIYD HNSYCIVMLNEVDKADETCVAYWTLDTCGESFGPFIVETTAEIKSDPSVTVRDFTITNTLNPQEMPRVVRQFNFHRWTEG SAVPSSKAALLELLDNVGKWQGQSGNKPVTVHCLDGAAKSGLFVASSCILERVKTEKEVDVFQTIKQMRLNRPQLIDSLE QFKFCHEIALEFLNSSSQPNGAS |
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