Gene
| Gene Model ID | pfu_aug1.0_579791.1_57830 |
|---|---|
| Locus | scaffold579791.1 : 20 ... 237 : + |
| To GenomeBrowser | scaffold579791.1:20..237 |
| Genes list of scaffold | scaffold579791.1 |
| Synonym | NA |
Manual annotation
| Study field | 20 basic cell biology |
|---|---|
| Gene name | ubiquitin |
| Description | Identify to XP_002764220.1| PREDICTED: ubiquitin-like, partial [Callithrix jacchus |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_579791.1_57830.t1 | 1 | 1 | Rad60-SLD | 1 | 71 | 2.5e-21 | 75.1 | 1.5e-24 | 2.7e-21 | 75.0 |
| pfu_aug1.0_579791.1_57830.t1 | 1 | 1 | ubiquitin | 6 | 72 | 2.0e-35 | 120.0 | 1.2e-38 | 2.2e-35 | 119.8 |
| pfu_aug1.0_579791.1_57830.t1 | 1 | 1 | Ubiquitin_2 | 11 | 69 | 2.9e-07 | 30.6 | 6.3e-10 | 1.2e-06 | 28.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_579791.1_57830.t1 | gi|312371071|gb|EFR19336.1| | 2.0e-34 |
Transcript
| Transcript ID | pfu_aug1.0_579791.1_57830.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_579791.1_57830.t1 atgcagatttttgtgaagaccctgacaggcaagaccatcaccttggaagtagaaccctctgacaccattgagaatgtcaa ggccaagatccaggataaggagggaattcccccagaccaacagagattgatctttgctggtaaacagttggaggacggaa gaacactgtcagactataacatccagaaggagtccacactccatcttgtacttcgtct |
|
Protein
| Protein ID | pfu_aug1.0_579791.1_57830.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_579791.1_57830.t1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR |
|