Gene
| Gene Model ID | pfu_aug1.0_5798.1_38214 |
|---|---|
| Locus | scaffold5798.1 : 67695 ... 71985 : - |
| To GenomeBrowser | scaffold5798.1:67695..71985 |
| Genes list of scaffold | scaffold5798.1 |
| Synonym | pfu_aug2.0_540.1_00859 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | tyrosinase-like protein 15 |
| Description | NCBI BLASTP best hit to ACF25906 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5798.1_38214.t1 | 2 | 1 | Tyrosinase | 27 | 186 | 1.1e-21 | 78.0 | 7.7e-26 | 1.1e-21 | 77.9 |
| pfu_aug1.0_5798.1_38214.t1 | 2 | 2 | Tyrosinase | 309 | 332 | 1.1e-21 | 78.0 | 0.12 | 1800.0 | -1.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5798.1_38214.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5798.1_38214.t1 ataccaggttctaatagcaacaagtacgataccattgccaacatcatacgatccaatcctaactccacgatggacggacc aggatttctcggctttaacagggcgtatatagagttatttgagagggccttacaggagttgatacccgacgtgacggtac cctactgggattctaccaaggatttctacatggacgaccccaaagaatcagtcttatggacatggatgttcttcggtgat ggtaacggctttgtcagcgagggaccgttcgctaactggacagacgaaaatgggggacgattgttccgcgaagtaggcga gaatccctccagtttattcaccttacatggtctggaggcaatcttagcccgcaaaaaccattatatgatcacattaccac aacctacagacctgaccaaacgatttaccatagagggacaacaaaatggtgtccacgcatgggtgggtggccagatgcgc attcgggagctgtccgcgcaggaccccgttttcttcatgcatagagccttcgtggattatatatggaataccttcataga aaagtcaggggtggatcctggcagtgattatccaattaagggtggagatgctaacaaaccagaaaatacgatgcattact tttcacagaacaccaatagggacggatacaagctggattctttgtacatagattccccccaatgcaactccacgcacaag agctgtgggtcggtgtggttgaaatgcacgtacttttggaagccctttaagaagcatttatgtgtctctgttacacgggc ctttgctgatattaaacccagtccgccaacgctagataaagtacctaaactttcaggtacaccttataacgtggtctttg tcgacattcgcacaaaacaacttaagagaacaaaacaactgaagaaaatctcaaaaaatcgggtaacagacatgcaaaac ccgccgccacaaaacaataccaccaaccaagctcaaaacactataacaaacgaaaagattaatgcgtcaattaattga |
|
Protein
| Protein ID | pfu_aug1.0_5798.1_38214.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5798.1_38214.t1 IPGSNSNKYDTIANIIRSNPNSTMDGPGFLGFNRAYIELFERALQELIPDVTVPYWDSTKDFYMDDPKESVLWTWMFFGD GNGFVSEGPFANWTDENGGRLFREVGENPSSLFTLHGLEAILARKNHYMITLPQPTDLTKRFTIEGQQNGVHAWVGGQMR IRELSAQDPVFFMHRAFVDYIWNTFIEKSGVDPGSDYPIKGGDANKPENTMHYFSQNTNRDGYKLDSLYIDSPQCNSTHK SCGSVWLKCTYFWKPFKKHLCVSVTRAFADIKPSPPTLDKVPKLSGTPYNVVFVDIRTKQLKRTKQLKKISKNRVTDMQN PPPQNNTTNQAQNTITNEKINASIN |
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