Gene
| Gene Model ID | pfu_aug1.0_5799.1_31048 |
|---|---|
| Locus | scaffold5799.1 : 19966 ... 29935 : - |
| To GenomeBrowser | scaffold5799.1:19966..29935 |
| Genes list of scaffold | scaffold5799.1 |
| Synonym | pfu_aug2.0_101.1_03607 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5799.1_31048.t1 | 1 | 1 | MFS_1 | 34 | 186 | 2.8e-12 | 46.0 | 4.5e-16 | 3.4e-12 | 45.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5799.1_31048.t1 | gi|291221391|ref|XP_002730705.1| | PREDICTED: organic cation transporter protein-like [Saccoglossus kowalevskii] | 2.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5799.1_31048.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5799.1_31048.t1 atggaggaaaaccaaataaaacattttgatgatatatttcaatacattggtgattttggaccataccagaagaggctgta ctttatggttattttgcccgctgctatatctgcattacctacgttaggaacagtctttattctagctgatcgtctacaca ggcgagccatgttctgtgccagtatgctgcttggaggaatatcttgtttatgtaccatattcaccgtcatgtatgcacca cacgacctaagttggacgacagttgcattatccaatataggaaagctgggtgcatctgcctcttttgctgttattttaat tttcacaccagaattatacccaacaaagatacgtggcagtgccttaggattgacaaattttattgggaaaactgggggag tggtttcaccttatgttgcagatttgagccttattgtacacagcgacatgaaggtggccctgccattgatagtgtttggt gggctgatgataggatcaggacttctagctttcacattaccagaaactctgggtcgaaaactcccagaaactattgaaga agcagaagctatgacaagaaatcaccaatcagaatctgaagaagcattattaccaaaggaccaagagaagaaataa |
|
Protein
| Protein ID | pfu_aug1.0_5799.1_31048.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5799.1_31048.t1 MEENQIKHFDDIFQYIGDFGPYQKRLYFMVILPAAISALPTLGTVFILADRLHRRAMFCASMLLGGISCLCTIFTVMYAP HDLSWTTVALSNIGKLGASASFAVILIFTPELYPTKIRGSALGLTNFIGKTGGVVSPYVADLSLIVHSDMKVALPLIVFG GLMIGSGLLAFTLPETLGRKLPETIEEAEAMTRNHQSESEEALLPKDQEKK |
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