Gene
| Gene Model ID | pfu_aug1.0_58.1_07335 |
|---|---|
| Locus | scaffold58.1 : 26551 ... 40665 : - |
| To GenomeBrowser | scaffold58.1:26551..40665 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug2.0_113.1_10292 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_58.1_07335.t1 | 5 | 1 | WD40 | 2 | 14 | 3.3e-15 | 55.2 | 0.079 | 590.0 | 0.6 |
| pfu_aug1.0_58.1_07335.t1 | 5 | 2 | WD40 | 27 | 53 | 3.3e-15 | 55.2 | 0.00063 | 4.7 | 7.2 |
| pfu_aug1.0_58.1_07335.t1 | 5 | 3 | WD40 | 69 | 102 | 3.3e-15 | 55.2 | 1.0e-06 | 0.0076 | 16.1 |
| pfu_aug1.0_58.1_07335.t1 | 5 | 4 | WD40 | 116 | 153 | 3.3e-15 | 55.2 | 1.4e-09 | 1.1e-05 | 25.1 |
| pfu_aug1.0_58.1_07335.t1 | 5 | 5 | WD40 | 161 | 184 | 3.3e-15 | 55.2 | 0.086 | 640.0 | 0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_58.1_07335.t1 | gi|115627952|ref|XP_001180017.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_58.1_07335.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_58.1_07335.t1 atgctgtctgcagcaaacgatggtaacatcatagcatggtcaacggcaggaacggtgcatgatcttataccgattggaca gcctgtatactgtatggcaatcaatcagagacgtgaacaattggtatgtggagttaacggaagtatcagggtgtatagtc tagatgaagagaaggaatcaggtcatgtgatcaatatccaggttttatatgttgcaagggaacatacagacattgtaagg tgcattgtttcccatgagtcaagaatttactctgcagggtatgaccagcagattattatatacgactcgtcatataccag agataacagtttggaacctatctttcaagtaaatcaagcacatgatgcaggtatttgctgcatgttgttagaaaaagaca atgagaataatcaatggataatgacaggttcttttgacaagaccgtgaagatttggtccattgatggtaaatttatagta aagctggataacttcttatcaacagtcactggaatatgttatgtaccacggaacaagactgtttgggtagctgggggaac ctcctacgccagcttgtttgatcccaaatctggggataatgtatcagattttatagggaccttccagcaacaagaagagg agaaataccaactacaaatcttaaagtacttcccagaactgaatgttgttatatcatccaccagcagacgacatttgatt gtatggaagtataattcctcaggctgtattactgctctgaaatgccgtactcagctggagagcttatgctacacaaagaa ggtgccaattttgattttctctggtgataatgaaggtgtaataataaagtgggaaaggatgcaatcaaatcatttcatgt acagatgtcagatttaccagtttttggccagattgcgaagcaaaatccggtctatgaaaatggcaaagtccgtctgtcag tgcatcaacattttggttaaggtgttgcgtttaagtctgttgagaacaaaactgcttggagcagcaacttga |
|
Protein
| Protein ID | pfu_aug1.0_58.1_07335.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_58.1_07335.t1 MLSAANDGNIIAWSTAGTVHDLIPIGQPVYCMAINQRREQLVCGVNGSIRVYSLDEEKESGHVINIQVLYVAREHTDIVR CIVSHESRIYSAGYDQQIIIYDSSYTRDNSLEPIFQVNQAHDAGICCMLLEKDNENNQWIMTGSFDKTVKIWSIDGKFIV KLDNFLSTVTGICYVPRNKTVWVAGGTSYASLFDPKSGDNVSDFIGTFQQQEEEKYQLQILKYFPELNVVISSTSRRHLI VWKYNSSGCITALKCRTQLESLCYTKKVPILIFSGDNEGVIIKWERMQSNHFMYRCQIYQFLARLRSKIRSMKMAKSVCQ CINILVKVLRLSLLRTKLLGAAT |
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