Gene
| Gene Model ID | pfu_aug1.0_58.1_07336 |
|---|---|
| Locus | scaffold58.1 : 44186 ... 49543 : + |
| To GenomeBrowser | scaffold58.1:44186..49543 |
| Genes list of scaffold | scaffold58.1 |
| Synonym | pfu_aug2.0_113.1_10291 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_58.1_07336.t1 | 1 | 1 | RVT_1 | 6 | 205 | 3.7e-24 | 85.2 | 4.1e-28 | 6.1e-24 | 84.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_58.1_07336.t1 | gi|115628167|ref|XP_792610.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_58.1_07336.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_58.1_07336.t1 atgcatgtagacttaggctttgaaagatgatcaagtatcgagacacagttggccatcaccatagactccattgcccgcac cctggatgaaagaggtcaagtggacatagtgttgcttgactttgctaaagcatttgacaaagtcccccaccagaggttgc tccacaaactacagtttaatggtgttcggaacaagaccctccgatggatagaggacttccttaacaacagacagcaacag gtcctggatggccacacctcctccgccccagatgtcctgtctggagtcccgcagggaacggtgctcggcccgctgctctt cctctcattcatcaacaacttaccagaggtcaccaaatcagaggctcgcctatttgcagacgactgtttactgttctgcc cagtcaaaagtgccgctgacagtcagacattgcagcaggacctggcagcccttgcggaatgtgagaaggagtggcaaatg gcgttccatccagagaggtgtgtggtacatgtaatacaagtggcatccaagcgcagagtcatcagtgcggactacacctt acacaaccatcatcttgaggtagtagactcgagtaaatacctgggtataaccatcagcaacacactggagtgggataggc acattgataacatcactgccaaagcgaacagaactcttggctccctcaaacgaaacctaagggggtgcagaacaacagca cgagccagagcatacgagacgatcgtaagacccacattggaatatgctgcttcaatatgggatcctcagagcatcaaaca ggttacccaggtagaaaaagttcaacgcggagcagcccgatttgctaccaggaactattgggaccgacaaccaggtagtg tttcaagcatgatcaccgctttgggatgggaatcactacaagtccggagagttaagatccgcctcctactgctgttcaag atccaacagaacctggtagcaattccagccgactactacctcatgcagtctgatagcagaacaagagatcgacatgcacg tgcacggagtataacgctcatcattgagtattctcccgactggaagaagaagaagtatcgaaggtcaaggtcactaggaa ctagaattaaaaggagtctcctgaaagaacacgaggcaattatcactacgatacacttactaatcatgaacaaaaactgg atgaagaaacaactgaaccccaaaattaatttttgctatgacaacgagtacccgaccaacgccctttccatactgattct tcatatgtaa |
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Protein
| Protein ID | pfu_aug1.0_58.1_07336.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_58.1_07336.t1 MHVDLGFERXSSIETQLAITIDSIARTLDERGQVDIVLLDFAKAFDKVPHQRLLHKLQFNGVRNKTLRWIEDFLNNRQQQ VLDGHTSSAPDVLSGVPQGTVLGPLLFLSFINNLPEVTKSEARLFADDCLLFCPVKSAADSQTLQQDLAALAECEKEWQM AFHPERCVVHVIQVASKRRVISADYTLHNHHLEVVDSSKYLGITISNTLEWDRHIDNITAKANRTLGSLKRNLRGCRTTA RARAYETIVRPTLEYAASIWDPQSIKQVTQVEKVQRGAARFATRNYWDRQPGSVSSMITALGWESLQVRRVKIRLLLLFK IQQNLVAIPADYYLMQSDSRTRDRHARARSITLIIEYSPDWKKKKYRRSRSLGTRIKRSLLKEHEAIITTIHLLIMNKNW MKKQLNPKINFCYDNEYPTNALSILILHM |
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