Gene
| Gene Model ID | pfu_aug1.0_5808.1_38221 |
|---|---|
| Locus | scaffold5808.1 : 27977 ... 36645 : - |
| To GenomeBrowser | scaffold5808.1:27977..36645 |
| Genes list of scaffold | scaffold5808.1 |
| Synonym | pfu_aug2.0_2321.1_05490 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Chitin synthase like protein |
| Description | Chitin synthase (insect) like protein, best hit to BLAST EFX76951.1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5808.1_38221.t1 | 1 | 1 | Glyco_tranf_2_3 | 677 | 832 | 4.1e-12 | 46.3 | 2.4e-15 | 7.2e-12 | 45.5 |
| pfu_aug1.0_5808.1_38221.t1 | 2 | 1 | Chitin_synth_2 | 681 | 933 | 1.1e-29 | 103.2 | 8.8e-31 | 2.6e-27 | 95.4 |
| pfu_aug1.0_5808.1_38221.t1 | 1 | 1 | Glyco_trans_2_3 | 682 | 896 | 1.6e-14 | 54.0 | 5.3e-18 | 1.6e-14 | 54.0 |
| pfu_aug1.0_5808.1_38221.t1 | 2 | 2 | Chitin_synth_2 | 901 | 1027 | 1.1e-29 | 103.2 | 0.00042 | 1.3 | 7.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5808.1_38221.t1 | gi|321465953|gb|EFX76951.1| | hypothetical protein DAPPUDRAFT_306008 [Daphnia pulex] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5808.1_38221.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5808.1_38221.t1 atgaaggacatgtccagttccagagcatcgactctcacgcggacgtttaaagaacaacaggaagaagatgaaatcaggaa aaacgaggaaaaagatacttttcacgatgatttacctacaaagctaggcgaaaactctctcaagggcgattcactcccta agtatgttaaggagaagagtcactctttaccccgatatactcagttcggagtccatcacagcgagccaataaaagacgtg tccgggaaagtagctaaggttttcaccagtatatttttgacagtggcgattctagtgtgcacgatgatcagtaaaagtac cctgttgcttataacatcaaacatctataaaaacgtaacattaaaatgttccagagttgacttcgatcacgtgttggccg tggagacacttcatacaattgggatatgtatttttgtgttctacctcctccctagcctagatcctatccggggacttctc ttgactttcggtgtcgcgtttactccagctattctcaaaatgtttgatagccaatcagaaaaaggtcgtaaattctacac ccttattttcgacgttttagcttttgtggtacaactttcaattttactgttatggccaatacggaatataattgctgacg aggactatcaagacgcatgggctataatagtgtccttacttttaatttctcttggatggtgggaaaattatgtaaacaag tttactaagcttggaaaacttggtcaagtgctgcgagatttgaaaaggaatatacgacgcatgcgtacaaagacatttgc agtggtgagtgtttggaaaatcgttgtcacgcttggattaatgacggcattgatgagcaatttgaaaatgtcatgtgtga aagcgctcttcttcaaaggagataatcatgcaatggaatgcccacatttatcatacccaacagatacgttcaatgtagag agctcagcatacagaacggatccgttttggatcgcgatgatccaaatattttcgtgtttactgtgttataccttttccaa gacagcatgtaaaatcatgctccaagtggtcagtttctcacttccgctcatgttagctgctccagttatggcgggtcttt ttatcggaaactgtgagacttggaaatctgttggaaatacccaatttctgatgccggattacctgtactggacatgtgat atccatggaatcagtacagatttcttagaaattctaatttcggattattttcttcctataacattggcttggtggctttc attcatgtgggtgacttttcatatatggatccctcgagtggaacgcctggtccagacagaaagactcttcgtaacccctc tgtactgtggtgtaatgctagagcagtctctaatgctgaataggaggcgagacgacaaggatagagatttcagacattct gaaaaagaaaagcgttttcagattccttggataaacgaccagcgagatggcgggatacttcctggaaggagctcattgcg cactgatcgtacgcctatgatatacgtctgcgcaaccatgtggcacgaaactgaaaaagagatgatacaagtgctgacat ctatattcagaatggacaacgatcaatgcgcaaggaagaatgcgcagaagtttttcgatgttgtagaccccgactattat gaattcgaagtcaatattttctttgatgacgcttttgaaaaacacgatgatgatgagtatgaattccacgtcaattcgtt tgtaaaacaactcgtccgagtgatggatcaagctgcaagcaatgttcatcgagttccggttaagattccaccccctacta aataccccacaccttatggaggaaggctggagtggactttaccaggaaataacaaactaaacgttcaccttaaagacaaa gccaaaattcggatcaagaaaagatggagccaggtgatgtacatgtactatttactcggcctcaaacttgtatcacaacc cctggactcgaggcgtaaacagacgatcgccgataacagcttcatccttgcccttgacggggatgtagactttaaaccgt cagcagtacagctattggttgaccgaatgaagaaaaacgagaaagttggcgcggcttgtggcagaattcatcccattgga actggtcctatgatttggtatcaaaaatttgaatacgccgtcagccattggttacaaaaagcaacagaacacatgattgg ctgtgtactttgcagccccggatgtttttcgctattccgtgcctctgcacttatggacgacaacgtaatgagaaaatatg ccacgacatctagtaatgccagacactatgtacagtttgatcaaggtgaggatagatggttatgtacgctgctcttacaa caaggatatcgcgtggagtactccgccgctgccgatgccttgacttatgcaccggaaggatttgccgagttttacaatca gcgcaggcgctggtctccctcaacaatggcaaacatcatggacctgctgatggattggaaaaatgttatcagactgaatg aaaatatatccttcctctacattatataccagggactactttttctctcttctattgttacgccgggaactattttctta ttgatcattggggctttgaacagcgccttcaagatagacttaattacgtcacttatgatcaatctcactccactagttgt tttcctgttggcatgtttcttcacgaaaggaaaatatcagatcatactggccgagcttttctctttggtatacgctctga tcatgatggtagtagttgtcggtcttggacttgaaatgaaacgggaaggcctatgctcacctactacaattttcctgatt tttataatcggtgctttcgtcatatccgccatcatgcatcctcaagagttttattgcctccttcacggcgccctctactt cctttgtattccgagcatgtccatgttactgatgatctactccatatgtaatttacatgtagtctcgtggggaacgagag aaaacgcgattgctgcccagccgaatgcaaaacctgagaagaaagcaaaggaaaacaaaattgctgccatattgaataaa ttctccgggaagaaaaattcggaagaaagcgactatgtcttttcattcggaaacctattcaaatgtctttgttgtccaag gccttccggtaacgaagctgagaaaagatttgcggaggtgatggcgaagcttcaagatttggaagaagctgtttcaaaac cgaaacagggagaacctaaagacgtcaaggacgccgagactaatgttaatgatggcgatattatgagcgaagagggaaaa gggaaacagcctttagaggaaactggaattagatataatcctatcttccaatcatctagtctaccttacgaggaggacac gcccttttggattcatgatgacgatattgggcacggtaaaatacgctatatcagcaaagaggagaaagcgttctggaacg atctaatcaagaaatatctatatcctctacaacacaacgagaagcataaaaagaagatggaaaaagatcttctagagctg aggaacaagatgagccttatgttcttcatgatgaacgccttgtttatcatcattatcttcagtttacagtactccaacgc tagagacaaagggtcaggtctgtccataccactaccgtgtcatgatctggacacaggaaaagccctgtcactagaaccta tatcaatgttgtttatggctattttcggcattgcacttgtcattcagttcatttccatgtttttccatcgactagcaact ttcctccatatcatgtcgtcaacggaagtgaactgcatgaaacctaaccaatcagaagtgacggcgatggacatagctag taaagtacagttagtaaaagagatgcagaggtttgaggacgacgaggacaccaggtctatatccactataagcagtgaca tagacgaggacagcagcgtcacacaagatgattctcccaaaataaaacgaaagaagaccattctaaaaataacacgccgg aagcgaggtgccacgcctcagtctggaaatttgagcgggaaatttttaaccaattttatggagatggctaaagatctaga aaaaggcgaaagtggagcaagtaaagttactagaagaagtaaaaagcgtagcaaaaatgccaaaaaagcaatggatagat tggagcagaataaagatatggttttgaataaagctcatgttataaagtcgagatggcaaagactagcgaaagcttcaaaa tgggattccaatggcgataaatggggttccctcctgcggttagctatgggtcagtcccggacaagtctgaacacaatatc agaggatgacaaaagaagttcatgggcacggggcatttctaaggctatgagatctaatagtgaattttcaataaatacat tgcctgatcttggttcttggtctgtccgtaacagctacgctgaacctattcttaatatcatcactgaccaattagagaac gaaggtgcccatggacagttctcacatggacattcaaaagaaagtacacagttgaaaacgaaagtagaaattaatgcaca agacaatagtgcaagcatgcaaaataattttcaaagacatgaaaatgtatatgacagagttaaagattctaattcagact cggaatctgattctgtgtacgacgagtcagacttgtcatcgacacataacaacaccatgtcagatagctcacgtatacag atgtcatcgacacataacaacaccatgtcagatagctcacgtatacagatgtcaacattaaagacaacatcagacaactc gtctcccgtagaaaacggtgatacacatttatga |
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Protein
| Protein ID | pfu_aug1.0_5808.1_38221.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5808.1_38221.t1 MKDMSSSRASTLTRTFKEQQEEDEIRKNEEKDTFHDDLPTKLGENSLKGDSLPKYVKEKSHSLPRYTQFGVHHSEPIKDV SGKVAKVFTSIFLTVAILVCTMISKSTLLLITSNIYKNVTLKCSRVDFDHVLAVETLHTIGICIFVFYLLPSLDPIRGLL LTFGVAFTPAILKMFDSQSEKGRKFYTLIFDVLAFVVQLSILLLWPIRNIIADEDYQDAWAIIVSLLLISLGWWENYVNK FTKLGKLGQVLRDLKRNIRRMRTKTFAVVSVWKIVVTLGLMTALMSNLKMSCVKALFFKGDNHAMECPHLSYPTDTFNVE SSAYRTDPFWIAMIQIFSCLLCYTFSKTACKIMLQVVSFSLPLMLAAPVMAGLFIGNCETWKSVGNTQFLMPDYLYWTCD IHGISTDFLEILISDYFLPITLAWWLSFMWVTFHIWIPRVERLVQTERLFVTPLYCGVMLEQSLMLNRRRDDKDRDFRHS EKEKRFQIPWINDQRDGGILPGRSSLRTDRTPMIYVCATMWHETEKEMIQVLTSIFRMDNDQCARKNAQKFFDVVDPDYY EFEVNIFFDDAFEKHDDDEYEFHVNSFVKQLVRVMDQAASNVHRVPVKIPPPTKYPTPYGGRLEWTLPGNNKLNVHLKDK AKIRIKKRWSQVMYMYYLLGLKLVSQPLDSRRKQTIADNSFILALDGDVDFKPSAVQLLVDRMKKNEKVGAACGRIHPIG TGPMIWYQKFEYAVSHWLQKATEHMIGCVLCSPGCFSLFRASALMDDNVMRKYATTSSNARHYVQFDQGEDRWLCTLLLQ QGYRVEYSAAADALTYAPEGFAEFYNQRRRWSPSTMANIMDLLMDWKNVIRLNENISFLYIIYQGLLFLSSIVTPGTIFL LIIGALNSAFKIDLITSLMINLTPLVVFLLACFFTKGKYQIILAELFSLVYALIMMVVVVGLGLEMKREGLCSPTTIFLI FIIGAFVISAIMHPQEFYCLLHGALYFLCIPSMSMLLMIYSICNLHVVSWGTRENAIAAQPNAKPEKKAKENKIAAILNK FSGKKNSEESDYVFSFGNLFKCLCCPRPSGNEAEKRFAEVMAKLQDLEEAVSKPKQGEPKDVKDAETNVNDGDIMSEEGK GKQPLEETGIRYNPIFQSSSLPYEEDTPFWIHDDDIGHGKIRYISKEEKAFWNDLIKKYLYPLQHNEKHKKKMEKDLLEL RNKMSLMFFMMNALFIIIIFSLQYSNARDKGSGLSIPLPCHDLDTGKALSLEPISMLFMAIFGIALVIQFISMFFHRLAT FLHIMSSTEVNCMKPNQSEVTAMDIASKVQLVKEMQRFEDDEDTRSISTISSDIDEDSSVTQDDSPKIKRKKTILKITRR KRGATPQSGNLSGKFLTNFMEMAKDLEKGESGASKVTRRSKKRSKNAKKAMDRLEQNKDMVLNKAHVIKSRWQRLAKASK WDSNGDKWGSLLRLAMGQSRTSLNTISEDDKRSSWARGISKAMRSNSEFSINTLPDLGSWSVRNSYAEPILNIITDQLEN EGAHGQFSHGHSKESTQLKTKVEINAQDNSASMQNNFQRHENVYDRVKDSNSDSESDSVYDESDLSSTHNNTMSDSSRIQ MSSTHNNTMSDSSRIQMSTLKTTSDNSSPVENGDTHL |
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