Gene
| Gene Model ID | pfu_aug1.0_5813.1_31049 |
|---|---|
| Locus | scaffold5813.1 : 1 ... 12835 : - |
| To GenomeBrowser | scaffold5813.1:1..12835 |
| Genes list of scaffold | scaffold5813.1 |
| Synonym | pfu_aug2.0_236.1_20462 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5813.1_31049.t1 | 1 | 1 | BTB | 20 | 83 | 2.7e-14 | 53.0 | 4.4e-17 | 6.5e-14 | 51.8 |
| pfu_aug1.0_5813.1_31049.t1 | 2 | 1 | BACK | 63 | 83 | 1.3e-34 | 118.1 | 0.61 | 900.0 | -0.3 |
| pfu_aug1.0_5813.1_31049.t1 | 2 | 2 | BACK | 89 | 191 | 1.3e-34 | 118.1 | 1.6e-37 | 2.4e-34 | 117.2 |
| pfu_aug1.0_5813.1_31049.t1 | 3 | 1 | Kelch_6 | 199 | 243 | 2.0e-16 | 59.3 | 8.9e-10 | 1.3e-06 | 28.2 |
| pfu_aug1.0_5813.1_31049.t1 | 2 | 1 | Kelch_4 | 199 | 239 | 1.2e-07 | 31.3 | 3.0e-05 | 0.045 | 13.5 |
| pfu_aug1.0_5813.1_31049.t1 | 3 | 1 | Kelch_1 | 200 | 239 | 1.4e-30 | 104.5 | 3.3e-16 | 4.9e-13 | 48.3 |
| pfu_aug1.0_5813.1_31049.t1 | 2 | 1 | Kelch_2 | 200 | 239 | 1.6e-06 | 27.6 | 7.6e-07 | 0.0011 | 18.6 |
| pfu_aug1.0_5813.1_31049.t1 | 2 | 1 | Kelch_3 | 206 | 244 | 7.5e-10 | 38.7 | 5.7e-07 | 0.00085 | 19.4 |
| pfu_aug1.0_5813.1_31049.t1 | 3 | 2 | Kelch_1 | 242 | 263 | 1.4e-30 | 104.5 | 2.5e-06 | 0.0037 | 16.7 |
| pfu_aug1.0_5813.1_31049.t1 | 3 | 2 | Kelch_6 | 247 | 263 | 2.0e-16 | 59.3 | 0.029 | 42.0 | 4.5 |
| pfu_aug1.0_5813.1_31049.t1 | 2 | 2 | Kelch_2 | 250 | 299 | 1.6e-06 | 27.6 | 0.0038 | 5.6 | 6.8 |
| pfu_aug1.0_5813.1_31049.t1 | 2 | 2 | Kelch_4 | 264 | 302 | 1.2e-07 | 31.3 | 3.4e-06 | 0.005 | 16.5 |
| pfu_aug1.0_5813.1_31049.t1 | 3 | 3 | Kelch_6 | 265 | 305 | 2.0e-16 | 59.3 | 7.0e-10 | 1.0e-06 | 28.6 |
| pfu_aug1.0_5813.1_31049.t1 | 3 | 3 | Kelch_1 | 266 | 302 | 1.4e-30 | 104.5 | 7.8e-15 | 1.2e-11 | 44.0 |
| pfu_aug1.0_5813.1_31049.t1 | 2 | 2 | Kelch_3 | 266 | 311 | 7.5e-10 | 38.7 | 3.3e-07 | 0.00049 | 20.1 |
Transcript
| Transcript ID | pfu_aug1.0_5813.1_31049.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5813.1_31049.t1 atgctgtgtgaaatgacactaattgtgtataggaaatatccagagagaagcactagtaaagccgaagccaagtccgatag gataactcttcaggaaatagatcccaaagctctcatacaactgattgactttgtttatacatcagaaatccatgtaactg aggaaaatgtacagaccctgttacctgctgcaaatattttacaaatgacagaggttcgcgatgcttgctgtgaatttctt cagtcacaacttcatccatccaactgtataggcattaaggcattcgcagacctccatgcatgttctgacctacttaatta tgctcagacttatacagagcaacattttgtagatgttgttcattatgatgaatttttgtcattaccaccacaagacgtca caaagatgatctctagtgatagactaacagtcacaactgaagaacaggtatatgaggctgtcctatcttgggtgcagcat gacttggacaaaagacaagaaagtatagctgaactcttggagaatgtgagattaccgttaatgacacaagaatacctcgt acaaaaagtggaggaagagccattagtgaagaaaagcagtgtagcggtagtgaatggtttggtgtatgccgtaggaggat ttaatggatctctgagggtgaggacggtagatgtgtacgaccctgtcaaggacatatggacttcctgtcctacaatggag gcacgtagaagtacactgggtgtggcagtgctacacggcaatatttatgccgttgggggttttgacggctcatctggata cctgtatgccgtaggtggatatgacggagcatcgagacaatgtttgagttctgtcgagtgctataaccctctaacggaca tctggaatcctgtggctgaaatgtcctgtcgtagaagtggagctgccattacaaaaactcattatcctgaagcctgtggc tgctag |
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Protein
| Protein ID | pfu_aug1.0_5813.1_31049.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5813.1_31049.t1 MLCEMTLIVYRKYPERSTSKAEAKSDRITLQEIDPKALIQLIDFVYTSEIHVTEENVQTLLPAANILQMTEVRDACCEFL QSQLHPSNCIGIKAFADLHACSDLLNYAQTYTEQHFVDVVHYDEFLSLPPQDVTKMISSDRLTVTTEEQVYEAVLSWVQH DLDKRQESIAELLENVRLPLMTQEYLVQKVEEEPLVKKSSVAVVNGLVYAVGGFNGSLRVRTVDVYDPVKDIWTSCPTME ARRSTLGVAVLHGNIYAVGGFDGSSGYLYAVGGYDGASRQCLSSVECYNPLTDIWNPVAEMSCRRSGAAITKTHYPEACG C |
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