Gene
| Gene Model ID | pfu_aug1.0_58142.1_12893 |
|---|---|
| Locus | scaffold58142.1 : 2420 ... 3881 : + |
| To GenomeBrowser | scaffold58142.1:2420..3881 |
| Genes list of scaffold | scaffold58142.1 |
| Synonym | pfu_aug2.0_5180.1_02715 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_58142.1_12893.t1 | 2 | 1 | fn3 | 15 | 94 | 1.2e-07 | 31.7 | 1.2e-10 | 1.8e-06 | 27.9 |
| pfu_aug1.0_58142.1_12893.t1 | 2 | 2 | fn3 | 103 | 132 | 1.2e-07 | 31.7 | 0.014 | 200.0 | 2.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 3 |
Transcript
| Transcript ID | pfu_aug1.0_58142.1_12893.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_58142.1_12893.t1 atgaccccttgtgtctgggagcatgggaagccgcttcaagttcagagtttttcacatgctgatgttgaatcaacctccgt caatttgacctggatacccggattcaacggaggcgccgcacaacattttgtcatatcacatgactcaccgaagacatcag aatggattgtcgtgttaaatgtttctgattccggacagactcagctaatatctcagttgatccaaggactaatgccaaac aggcgatacagattcaggatcgtcagtgctaatagatttggtgatacaagtcagatgccgctctatgtagaatttactac aaaaggaggggatctccaacaataccaggttgcagcaccgacagcaaaaccccaaaacacccaatgcaaaaacacaaagc agacaagcacggaaagagacgcatacgggacaaggaacgtcaacgcacaacacagaaacatcaaacacaaaggactacac ataaaccaacgaggccaatgggcaaccggtgccgacttaggacggccatctgccacggaaatagcagaaggtgtggttat cctggattacgttcgcacaaccctcccacttttccgattacccagaagtctcgaagaacgtacaattgtggtgtccacaa ttgtacgttcttcgagacctctgggtaatcggaaaagtgggagggttgtgcgcacgtaa |
|
Protein
| Protein ID | pfu_aug1.0_58142.1_12893.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_58142.1_12893.t1 MTPCVWEHGKPLQVQSFSHADVESTSVNLTWIPGFNGGAAQHFVISHDSPKTSEWIVVLNVSDSGQTQLISQLIQGLMPN RRYRFRIVSANRFGDTSQMPLYVEFTTKGGDLQQYQVAAPTAKPQNTQCKNTKQTSTERDAYGTRNVNAQHRNIKHKGLH INQRGQWATGADLGRPSATEIAEGVVILDYVRTTLPLFRLPRSLEERTIVVSTIVRSSRPLGNRKSGRVVRT |
|