Gene
| Gene Model ID | pfu_aug1.0_583.1_43743 |
|---|---|
| Locus | scaffold583.1 : 1517 ... 8435 : - |
| To GenomeBrowser | scaffold583.1:1517..8435 |
| Genes list of scaffold | scaffold583.1 |
| Synonym | pfu_aug2.0_224.1_13825 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_583.1_43743.t1 | 1 | 1 | 7tm_1 | 64 | 376 | 4.1e-32 | 111.3 | 3.6e-36 | 5.4e-32 | 110.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_583.1_43743.t1 | gi|291396410|ref|XP_002714559.1| | PREDICTED: orexin receptor type 2 [Oryctolagus cuniculus] | 2.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_583.1_43743.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_583.1_43743.t1 atggccaccatcgaggagacgatattattcaccaataccagcggtggcatcaacgtaaccttgacaacggatgacagact ggaggaagcggaagcgaatatacttcttcgcaaactgaatgacgaaaaagcgatgcaatacctccccgtaatagcctaca tggttttactcatgcttgtcggaacttttggaaatatcctggtgttttgtgtttactattcaaagccgacaaaatcttcg tctcattatttcattttgaccttggccgtcttcgaccttttgacctgtatcatcggcatgccaacggaagtgacggattt gcgctatccgtacatgttctacgcccccgtggcgtgtaagattctacggttcatcgagtcggtttctacaattgggtcgt cgatcatcttaatcgccgttgcatttgatcgtttctacagaatttgcagactgggaaaacaagtttctacaaataagaca aaagttatatgtctgattgccgtcatagttggtgttcttacgtcatggccagcgtgcgttctatttggggaaaagacaat agagcttgggattccggaaatccacgccgtagattgttctacagacgattcaatgcgaggaaccatattcccgaccctat actatgggttcctctttatgcttttcttcatgtgtctgtcgttcttcacggtcatctatacaaaaattgggcgagtgatc tggaagcgcaaaaaggcaaaaataggcgagtcgatgacgggttcgttcaaggatagttccttcaacgagaacacgccctc tgaccaagtgtcgtcagatccggtcagcaacgacctctctacagagcaggacgggaactggagcgacggaaaacgatctt catccgggactcatttagcgtctcgaaaacgaggttcacggcacgagattcgtgttaccaggacaaccgtggtgctgttt gccgtaaccgtggcgtatgttgtcagtttcttcccatttttggttgtaatggttttgcgtaacgtcttaaaagacttcga gaaaaatttgtcaccggcagcggaagttgcgtacaaattctgctccaagtcgtactttattaacaatgcaataaatccgg taatttacagttttctgaacataaactttcgtaaggataccagaaatattttgagaaagtgtgtcgcttcttgttgttgc tgcaaagacacagaaatataa |
|
Protein
| Protein ID | pfu_aug1.0_583.1_43743.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_583.1_43743.t1 MATIEETILFTNTSGGINVTLTTDDRLEEAEANILLRKLNDEKAMQYLPVIAYMVLLMLVGTFGNILVFCVYYSKPTKSS SHYFILTLAVFDLLTCIIGMPTEVTDLRYPYMFYAPVACKILRFIESVSTIGSSIILIAVAFDRFYRICRLGKQVSTNKT KVICLIAVIVGVLTSWPACVLFGEKTIELGIPEIHAVDCSTDDSMRGTIFPTLYYGFLFMLFFMCLSFFTVIYTKIGRVI WKRKKAKIGESMTGSFKDSSFNENTPSDQVSSDPVSNDLSTEQDGNWSDGKRSSSGTHLASRKRGSRHEIRVTRTTVVLF AVTVAYVVSFFPFLVVMVLRNVLKDFEKNLSPAAEVAYKFCSKSYFINNAINPVIYSFLNINFRKDTRNILRKCVASCCC CKDTEI |
|