Gene
| Gene Model ID | pfu_aug1.0_583.1_43747 |
|---|---|
| Locus | scaffold583.1 : 44906 ... 72433 : + |
| To GenomeBrowser | scaffold583.1:44906..72433 |
| Genes list of scaffold | scaffold583.1 |
| Synonym | pfu_aug2.0_1883.1_11921 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_583.1_43747.t1 | 1 | 1 | Phosphodiest | 48 | 270 | 9.8e-10 | 38.2 | 1.6e-11 | 5.8e-08 | 32.4 |
| pfu_aug1.0_583.1_43747.t1 | 1 | 1 | PigN | 338 | 798 | 0.0 | 435.7 | 0.0 | 0.0 | 435.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_583.1_43747.t1 | gi|345315945|ref|XP_001505836.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_583.1_43747.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_583.1_43747.t1 atggagacctggcttttggttgtgacgggaattttcgtacatctgatcttcttctactccatatttgatatttacttcac gtcccccttggttcatggcatgtcaccatacaccgctcctgtcaaacctccagcaaagagattggtgctttttgttaccg atggtctccgagcagataaattctttaccttggatgaagataacaaaactagagcaccgtatctcaggaatgtgatagag aatgtaggagcatggggtgtgtctcataccagagtgccgacagaatctcggcctggtcatgtagctatgatagctggatt ctacgaagatgtcagtgctgtagcgaaaggttggaaagaaaatccagtggagtttgattctgttttcaatgagagccgtt atacttggtcatggggtagtccagatatactcccaatgtttgctaaaggtgcgtctggaggccatgtgttcatggattac tacccctcagaaaatgaagattttgctgcatcagatgcttccaagcttgacacgtgggtgtttgataagattaaggtatt tttcgacactgccaagaataatgccactctacagtccatgatgagacgtgatagaattgttttcttccttcatctcttgg gactggacactaatggacattcacacaaacctttctcagaagactacatggagaacataagaactgtagacaagggcatc aagaatttagtcaaacttatgaatgaattctatcactatgacaacgccacagcctacgtgatgtcagcggaccatggcat gaccgattggggctctcacggagcagggcatccatctgagaccttgaccccgttagtgacctggggggcagggatcaggg gacctaatagacctgggaacacggaggtgcataacgatggattttcacaggatattggccctcttgtgctttgttgtaag agcatctctactgtaattaaagaatcctatacccttatatcatcagctttggaaggtttgagatattatcaaacctacga tagattattcttaggggtcagtattgtatgtggttacttgggatggatgtcctatattttgaccttgatcctaagagagc attgtgagttatctacagagaggacggcactggaaaaactacggcagccgagtgccctgtctgatacctgtataaacacc gctgctggtgtagtaatgataattgtgttcactttgcttacagtgcagtccttaccctggaccaactatttatactgttt acttccagtaattttatggactgtagtgctgaaaagatggtttacattcaaatgtgctttacaacacttgcttgtcacaa gaaaaatggaaatcattttggccgtattattttgtattggtggactagaaattctggtagcaggattcttccatagagaa ttattgtcagtaggacttgtatgtatggggttatggcccttggctagtggaatacctagactcacatgttcacaaaagac atcccagtatggttggtgtttgtcctgtatattactatccatatttcctttactgcctgtggtagggagagatatcaact ataacttagtcctattagccggtgtattaggagttatcatagctgttatagctgtattaaagctgaatacctcagataga tctaaaagaaatactcatataggtctgttatttcagatttgtataatactcattatggtatcaacaatagtggtgtacac tacatatcggagtataaaagctgctacaggacttccctgggttaacagactcataagctggagcacactagcatcagcat tagttttacctctcctgagtgagacgggaattcttcacagacttctcctgattgccttgtcagtcttaccaacctattta ctccttagcatatcacatgaaggtttatttattttgtgcctgtgtataacattgtacttctggctgcgtgtagagagtga ccagaacaaaaagaaaacaccactagacaaagcagatttctgcatagaattgaagataggagacaatcaaagacagcttg tgataagtgacatcaggagggctctgttctatatattttttatactcactgcattctttggaactggaaatatagccagt ataaacagttttgagccagcctctgtgtattgttttcttactgtgttcaacccctttgttatgggaacattgatgatgtt aaagaatgtgataccattaattctagtcagttgtgtgtttactgccattcatgtgacgtcacatatacccacaagggctc tgttcttgctggttttactcatgtctgacctcatggcaataaacttctttttcctggtgcaagactatggtagctggttg gagattggtaccagtataagtcactatgttatagtgatgtgtatgaacatcttcctcatgttactgtttgtactgtcaaa tgtcctcacatcgaaaagaatctcattgaccaaagtcaaatcaaagtga |
|
Protein
| Protein ID | pfu_aug1.0_583.1_43747.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_583.1_43747.t1 METWLLVVTGIFVHLIFFYSIFDIYFTSPLVHGMSPYTAPVKPPAKRLVLFVTDGLRADKFFTLDEDNKTRAPYLRNVIE NVGAWGVSHTRVPTESRPGHVAMIAGFYEDVSAVAKGWKENPVEFDSVFNESRYTWSWGSPDILPMFAKGASGGHVFMDY YPSENEDFAASDASKLDTWVFDKIKVFFDTAKNNATLQSMMRRDRIVFFLHLLGLDTNGHSHKPFSEDYMENIRTVDKGI KNLVKLMNEFYHYDNATAYVMSADHGMTDWGSHGAGHPSETLTPLVTWGAGIRGPNRPGNTEVHNDGFSQDIGPLVLCCK SISTVIKESYTLISSALEGLRYYQTYDRLFLGVSIVCGYLGWMSYILTLILREHCELSTERTALEKLRQPSALSDTCINT AAGVVMIIVFTLLTVQSLPWTNYLYCLLPVILWTVVLKRWFTFKCALQHLLVTRKMEIILAVLFCIGGLEILVAGFFHRE LLSVGLVCMGLWPLASGIPRLTCSQKTSQYGWCLSCILLSIFPLLPVVGRDINYNLVLLAGVLGVIIAVIAVLKLNTSDR SKRNTHIGLLFQICIILIMVSTIVVYTTYRSIKAATGLPWVNRLISWSTLASALVLPLLSETGILHRLLLIALSVLPTYL LLSISHEGLFILCLCITLYFWLRVESDQNKKKTPLDKADFCIELKIGDNQRQLVISDIRRALFYIFFILTAFFGTGNIAS INSFEPASVYCFLTVFNPFVMGTLMMLKNVIPLILVSCVFTAIHVTSHIPTRALFLLVLLMSDLMAINFFFLVQDYGSWL EIGTSISHYVIVMCMNIFLMLLFVLSNVLTSKRISLTKVKSK |
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