Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5830.1_09225
Locus scaffold5830.1 : 12850 ... 16635 : -
To GenomeBrowser scaffold5830.1:12850..16635
Genes list of scaffold scaffold5830.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5830.1_09225.t1 gi|156387361|ref|XP_001634172.1| predicted protein [Nematostella vectensis] 1.0e-19

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
egg-4cell 2
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_5830.1_09225.t1
Definition-
>pfu_aug1.0_5830.1_09225.t1
atggaaccgtatgcagtagaaacgttatattatgcatgtgaaatatacacctctgaaaaatctggatcagatgaaagtgg
aaatggctcgcaagaaaaaccatttaaaagtatattacagtgtcagacgtatgatgccctactactggccacagaagctg
ccatctgtgtgtatggtgttatatcagccgtaccagaaggaaaaactgcaccagatggtcatgaactgacggcagactac
tgggagttgattggagaatcaccaccagggggagctgataacattctcaacgaggtatga

Protein
Protein IDpfu_aug1.0_5830.1_09225.t1
Definition-
>pfu_aug1.0_5830.1_09225.t1
MEPYAVETLYYACEIYTSEKSGSDESGNGSQEKPFKSILQCQTYDALLLATEAAICVYGVISAVPEGKTAPDGHELTADY
WELIGESPPGGADNILNEV

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