Gene
| Gene Model ID | pfu_aug1.0_5849.1_02082 |
|---|---|
| Locus | scaffold5849.1 : 1 ... 26474 : + |
| To GenomeBrowser | scaffold5849.1:1..26474 |
| Genes list of scaffold | scaffold5849.1 |
| Synonym | pfu_aug2.0_2456.1_22071 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | PI3K-like |
| Description | NCBI blastP tip hit to Anolis carolinensis phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like[XP_003229426.1],GH-IGF axis |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5849.1_02082.t1 | 1 | 1 | PI3K_p85B | 3 | 75 | 2.5e-26 | 90.8 | 2.3e-29 | 5.6e-26 | 89.7 |
| pfu_aug1.0_5849.1_02082.t1 | 2 | 1 | PI3K_rbd | 148 | 261 | 2.7e-22 | 78.7 | 1.1e-23 | 2.8e-20 | 72.2 |
| pfu_aug1.0_5849.1_02082.t1 | 1 | 1 | PI3K_C2 | 320 | 414 | 6.6e-25 | 87.5 | 8.6e-28 | 2.1e-24 | 85.9 |
| pfu_aug1.0_5849.1_02082.t1 | 1 | 1 | PI3Ka | 457 | 633 | 0.0 | 209.2 | 0.0 | 0.0 | 208.1 |
| pfu_aug1.0_5849.1_02082.t1 | 2 | 1 | PI3_PI4_kinase | 692 | 775 | 1.3e-28 | 100.0 | 1.0e-15 | 2.5e-12 | 46.7 |
| pfu_aug1.0_5849.1_02082.t1 | 2 | 2 | PI3_PI4_kinase | 764 | 861 | 1.3e-28 | 100.0 | 2.7e-17 | 6.8e-14 | 51.9 |
| pfu_aug1.0_5849.1_02082.t1 | 2 | 2 | PI3K_rbd | 773 | 825 | 2.7e-22 | 78.7 | 0.019 | 48.0 | 3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5849.1_02082.t1 | gi|327289427|ref|XP_003229426.1| | PREDICTED: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like isoform X1 [Anolis carolinensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5849.1_02082.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5849.1_02082.t1 atatatgtgaacagagatgagacattagagaggataaagtccagtttgtgggacgaggccaaattgttccccttatacaa caagcttctagacccggtagcgtatatctttgtcagtattacccaggatgcagagaaagaggagttttatgacgaaacta gaagattgtgtgacctacgtctatttcagccaattcttcaagttgttgaaccaaagggaaatcgagacgaaaaaattgtg aactatgaaataggtatgaccatcggtatccctaccagtgattttgacgaaatgaaggacattgaggtcatgaccttcag acgtaacatcctagagacgtgtcgctcggccacagaggaacggcagagaaagggacatcacagcctggcatgttacgttt atcctccggatgtggagacgtcagaaatactaccgatacatctacaggaaaaactcacaaaacaaactccttcaaatcat gtgataatttgtatatggatcgtatctgaagaaggaattaggaacaaatttagcgtcagtgtgccgcacacgtctcggcc tatagatgtgatagccgagacaatacgacggcgaggtcgacttatgaacattacaaaggaacaagtagaaggactcatag agacgtatagaacttcttacgctctcaaagtgtgtggatgtgatgaattcttattagaggattatcctttaagtcagtat aagtatgtgagagaatgtattgccagagataagatcccccagtttatgttactgacgagagaaagtatatataaaactat accggaaaaccagttcatagcaccgtcatatactcagagaggtgtccagctattactggacatcaacaaccaacagacaa tctcactttgggaaatccaggccaagcttaggatcaagatccactgtgcttcatatctcaatgtcagggagagtggaaag atctacgtaaaggcgggtatatatcacggtacagaggccctgtgtgagtcccaatgttcgcgggaggtggagtccagtaa ccctcggtggaacgagtggctggacttcctgtacctccccgacctgccgcgatcagcaaggctctgtctctctatatgct cagttataaagaagaaaaacaggaaactaacatatgcccttgcatggggaaacctccagatgtttgactttaacgacaga cttctgagtgggaaggtcagcttgaacctatggcccatgccccagggaatggatgaactactaaatccaataggaattcc aggtatcacccgaaaaattggacagaaaacttttgcatcaacgnttacggacagactctcacatctactggaatcaccac agagtttacgcaaggaagaggagattgtagaagatattatgaaacgtgatccattgtcagaaatatctgaacaggaaaaa gaaatcttatggaaaagaagggaatattgccttaaacatgcccactcactgcccaaacttctacaggctgtcaaatggaa tgacagagaaaatgttgctcaattatacatgttactacagcgatggccggttttacccccggaggtcgtgttagaactcc tagattgttccttcccagatttacaagtccgtaactacgctgttgagtgtttagatcggggactgagcgatgataaacta cagctatatctcttacaactagtccaggcgttaaagtttgagccatacttagacaatcctatcacccggtttctactaaa aagatctcttctcaatcaaaggatcggacagttcttcttctggcatctaaagtcagagatgcatcagacaaatatccgta cccgttttggtcttgttctggaggcgttctgtcgaggttgtggatcatatctaaagatgctgaccaaacaggtagaggct ctggacaaactgaccaaacttactgatgccctcagactggaagtcaaagatgaccgtgatgaactgatgaagtacctcca tgaacagttacagcagcctgactaccatgacgctctacggaactttctgtctccacttaacaacagctacaggcttgatt tacgtcaggacatgttaacactacagctgataagagtgatggacgtattatggaaaaatgaaggattggatttaaggatg attccgtacggctgtgtatcgacgggtaaggacataggtatcatagaggtggtacggcaatctaaaacgatcatggccat ccaatcagagggcggcatgaagagtaatatacagatggatgcacggcagctacataaatggatcaaggagaaaaataagg aaaagttagtatttcatatagactttggacacttcctgaatcacaagaagaagaagtttggtattaatagagagcgagta ccgttcgtactgactgaggacttcatcagggtcatagctaaaggctcggaccaagctagaaaatctgatgaatttaaaaa attccaggagctgtgctgtcaggcttaccttatactacgtcagagtgctaacttaatgatcagtctgttcaccatgatgt tgtcgtgcggaatccccgagttacaaacgctcgacgacatcagctatctccggaaaactctccaggtagaaaataccgaa gaacaagctctcaattacttcatagaacaattccgtagtgcatatggtgaccaatggactactaaagtagactggatgtt ccattatttccggcacaaataa |
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Protein
| Protein ID | pfu_aug1.0_5849.1_02082.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5849.1_02082.t1 IYVNRDETLERIKSSLWDEAKLFPLYNKLLDPVAYIFVSITQDAEKEEFYDETRRLCDLRLFQPILQVVEPKGNRDEKIV NYEIGMTIGIPTSDFDEMKDIEVMTFRRNILETCRSATEERQRKGHHSLACYVYPPDVETSEILPIHLQEKLTKQTPSNH VIICIWIVSEEGIRNKFSVSVPHTSRPIDVIAETIRRRGRLMNITKEQVEGLIETYRTSYALKVCGCDEFLLEDYPLSQY KYVRECIARDKIPQFMLLTRESIYKTIPENQFIAPSYTQRGVQLLLDINNQQTISLWEIQAKLRIKIHCASYLNVRESGK IYVKAGIYHGTEALCESQCSREVESSNPRWNEWLDFLYLPDLPRSARLCLSICSVIKKKNRKLTYALAWGNLQMFDFNDR LLSGKVSLNLWPMPQGMDELLNPIGIPGITRKIGQKTFASTXTDRLSHLLESPQSLRKEEEIVEDIMKRDPLSEISEQEK EILWKRREYCLKHAHSLPKLLQAVKWNDRENVAQLYMLLQRWPVLPPEVVLELLDCSFPDLQVRNYAVECLDRGLSDDKL QLYLLQLVQALKFEPYLDNPITRFLLKRSLLNQRIGQFFFWHLKSEMHQTNIRTRFGLVLEAFCRGCGSYLKMLTKQVEA LDKLTKLTDALRLEVKDDRDELMKYLHEQLQQPDYHDALRNFLSPLNNSYRLDLRQDMLTLQLIRVMDVLWKNEGLDLRM IPYGCVSTGKDIGIIEVVRQSKTIMAIQSEGGMKSNIQMDARQLHKWIKEKNKEKLVFHIDFGHFLNHKKKKFGINRERV PFVLTEDFIRVIAKGSDQARKSDEFKKFQELCCQAYLILRQSANLMISLFTMMLSCGIPELQTLDDISYLRKTLQVENTE EQALNYFIEQFRSAYGDQWTTKVDWMFHYFRHK |
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