Gene
| Gene Model ID | pfu_aug1.0_585598.1_21872 |
|---|---|
| Locus | scaffold585598.1 : 1 ... 232 : - |
| To GenomeBrowser | scaffold585598.1:1..232 |
| Genes list of scaffold | scaffold585598.1 |
| Synonym | NA |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | paramyosin |
| Description | Paramyosin partial sequence. BLASTP top hit to AB571843 (Haliotis discus discus). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_585598.1_21872.t1 | 1 | 1 | ADIP | 8 | 76 | 2.4e-06 | 27.5 | 7.7e-09 | 2.7e-06 | 27.3 |
| pfu_aug1.0_585598.1_21872.t1 | 1 | 1 | Myosin_tail_1 | 10 | 76 | 7.2e-18 | 63.7 | 2.3e-20 | 8.1e-18 | 63.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_585598.1_21872.t1 | gi|318609972|dbj|BAJ61596.1| | paramyosin [Haliotis discus discus] | 2.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_585598.1_21872.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_585598.1_21872.t1 tttgaaccattttctgatttccttcaacagcaacgccagaacctccaggtacagttgagtgctttacagagtgactacga caacttgaacgcccgttatgaggaggaatctgaggccgcctccaacctcaggaataccctcagcagagtcaacgctgaat tcgctgctctcaagacaagatacgacaaagaaatcctcgccaagacagaggagatggaagaaatgaggtcag |
|
Protein
| Protein ID | pfu_aug1.0_585598.1_21872.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_585598.1_21872.t1 FEPFSDFLQQQRQNLQVQLSALQSDYDNLNARYEEESEAASNLRNTLSRVNAEFAALKTRYDKEILAKTEEMEEMRS |
|