Gene
| Gene Model ID | pfu_aug1.0_5859.1_45310 |
|---|---|
| Locus | scaffold5859.1 : 9156 ... 15371 : + |
| To GenomeBrowser | scaffold5859.1:9156..15371 |
| Genes list of scaffold | scaffold5859.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5859.1_45310.t1 | 1 | 1 | adh_short | 4 | 98 | 1.1e-14 | 54.6 | 6.4e-18 | 1.6e-14 | 54.1 |
| pfu_aug1.0_5859.1_45310.t1 | 1 | 1 | KR | 5 | 91 | 5.9e-08 | 32.5 | 3.4e-11 | 8.4e-08 | 32.0 |
| pfu_aug1.0_5859.1_45310.t1 | 1 | 1 | adh_short_C2 | 12 | 94 | 1.8e-07 | 31.1 | 1.6e-10 | 4.0e-07 | 30.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5859.1_45310.t1 | gi|195997057|ref|XP_002108397.1| | hypothetical protein TRIADDRAFT_19714 [Trichoplax adhaerens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5859.1_45310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5859.1_45310.t1 atggatggaaagacggtcatcgtcactggatccaacactggaatcggcaaggaaacggtcagggatctggctaaaagagg agcaagaattatcatggcttgtagagacatgaagaggaccgaacccgcggcagaggaactacggactgacaccggaaata aaaacatcgtggtgcgcaaactcgatcttgcgtcgctaaaatcagtacgaagttttgcagaggaaattctcaaaacggag tcaagaattgatatactgataaataatgcagttgcaaatccacttgatcttgaaaatctgaacagtgagaaaggatacga tccgtacgaagcatatcatcgcagcaaactactcaacattctcttcaccagggaacttagcagacgactcaaaggttctg gagtgactgctaattctcttcaccctggctttgtgaatacagatctacctcgacatttcaacaagttcctgaattttgta atgcaacctttcatgtggttaagtttgaaagattctcgcgcaggcgcacaaacgtcaatttattgcgcagtggccgagga actggttggtgtgagtgggaagtactttagcgactgcgcagtgaaggaggaagtaaaacaagcacgagacgaccaactag ccaaacgactgtgggaaatgtcagaggaaaaggtggctaaggcaaaatag |
|
Protein
| Protein ID | pfu_aug1.0_5859.1_45310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5859.1_45310.t1 MDGKTVIVTGSNTGIGKETVRDLAKRGARIIMACRDMKRTEPAAEELRTDTGNKNIVVRKLDLASLKSVRSFAEEILKTE SRIDILINNAVANPLDLENLNSEKGYDPYEAYHRSKLLNILFTRELSRRLKGSGVTANSLHPGFVNTDLPRHFNKFLNFV MQPFMWLSLKDSRAGAQTSIYCAVAEELVGVSGKYFSDCAVKEEVKQARDDQLAKRLWEMSEEKVAKAK |
|