Gene
| Gene Model ID | pfu_aug1.0_5860.1_52630 |
|---|---|
| Locus | scaffold5860.1 : 1 ... 16848 : + |
| To GenomeBrowser | scaffold5860.1:1..16848 |
| Genes list of scaffold | scaffold5860.1 |
| Synonym | pfu_aug2.0_156.1_20339 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5860.1_52630.t1 | 2 | 1 | zf-C3Hc3H | 54 | 64 | 8.5e-16 | 57.7 | 0.34 | 5100.0 | -2.4 |
| pfu_aug1.0_5860.1_52630.t1 | 2 | 2 | zf-C3Hc3H | 143 | 197 | 8.5e-16 | 57.7 | 5.7e-20 | 8.5e-16 | 57.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5860.1_52630.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5860.1_52630.t1 atggagaggtgacgcagacagcgatgctgaaagtattgacagcgaccaagaagatctactcaagtatgcaggtgtgtaca cagcagaggaagttgcccttataatgagggataagttaatacggctacaatccctgtatatagaccagttcaaacgtctg cagcacattatgaaagagaaacgcaggaaatacctgcacactcacaaacaggagagagaggctttaggcagcataaagta ctacaagaatcaacctgagtccagagaggaatatttcaagttaaaagcactgaaacgataccacaaacgtcatggaaagg aagcccttctacacagacagtccaagcagaggaggatagctgtgtcggaaggtccaaattaccgtcctccctcgtttcct aagtgtattcacatagaggatgacacagcagttaagtgtacagaccgggccatgcctctgaccaaatactgttttaacca cattttagaggacccataccagaccctctatagggcgtgtcagtttggagggggcacctgtgggatgccagcattcagct tagaggaggatgtgttctgtaacctacatgtgccccttaaacaaatggaaccaagagtatcactgaaaatggaggagcag ggtgaggagctcactaaagaagccctggatatgctcctcccacaactcaacttcacacccaatgaaatcatgcatcgtca acttctcacgcaaaatcctcaaatgccggacaccatcttctctgatctgggagacgttgattctgaggaggcactaaaac attcaaatgactccaatcagtcatttaagtcatcctcatctagttcattgccatcttcatccagacaaaaccttccttct gatatcgcagaaaaaccaaaacccaaatatggaccattgctgctgcagcatttgaaagggacagtaaatctgagtaacta tagagacagttaccaagcaacggaaaccacagtaacaaatagcagcacctcgacctctgacctcggtgacaaggtcacag atagtgaaggtcaggaagttgcacctactcaaaatgcagacagcaatagtgcaacagattcttcaaatagtttgccaaat gggaacggaaacttggaggggaatgaaactcagaacggagacgatcaagttatagatatcacggaggatactgacataga tataaacggaaactga |
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Protein
| Protein ID | pfu_aug1.0_5860.1_52630.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5860.1_52630.t1 WRGDADSDAESIDSDQEDLLKYAGVYTAEEVALIMRDKLIRLQSLYIDQFKRLQHIMKEKRRKYLHTHKQEREALGSIKY YKNQPESREEYFKLKALKRYHKRHGKEALLHRQSKQRRIAVSEGPNYRPPSFPKCIHIEDDTAVKCTDRAMPLTKYCFNH ILEDPYQTLYRACQFGGGTCGMPAFSLEEDVFCNLHVPLKQMEPRVSLKMEEQGEELTKEALDMLLPQLNFTPNEIMHRQ LLTQNPQMPDTIFSDLGDVDSEEALKHSNDSNQSFKSSSSSSLPSSSRQNLPSDIAEKPKPKYGPLLLQHLKGTVNLSNY RDSYQATETTVTNSSTSTSDLGDKVTDSEGQEVAPTQNADSNSATDSSNSLPNGNGNLEGNETQNGDDQVIDITEDTDID INGN |
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