Gene
| Gene Model ID | pfu_aug1.0_5888.1_09232 |
|---|---|
| Locus | scaffold5888.1 : 7508 ... 10785 : - |
| To GenomeBrowser | scaffold5888.1:7508..10785 |
| Genes list of scaffold | scaffold5888.1 |
| Synonym | pfu_aug2.0_1588.1_28393 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | testis-specific serine/threonine kinase1 |
| Description | Best hit to HQ678180 (Mytilus edulis).323 bits, 5e-86 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5888.1_09232.t1 | 1 | 1 | Pkinase | 56 | 311 | 0.0 | 234.1 | 0.0 | 0.0 | 233.8 |
| pfu_aug1.0_5888.1_09232.t1 | 1 | 1 | Pkinase_Tyr | 57 | 306 | 6.1e-39 | 133.6 | 2.90069e-42 | 8.7e-39 | 133.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5888.1_09232.t1 | gi|343455234|gb|AEM36057.1| | putative testis-specific serine/threonine kinase [Mytilus edulis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5888.1_09232.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5888.1_09232.t1 atgggcgacgatgcttcctcgcgatcaagaagtctgcaaaaagaacttgaagtgatgcagagcgaagttgaagccgtcga aatcagaaggtcgccgaatgacaagacagagtctgtaaagtacagaccaacgtatagggccattctagccaacaggggct ttctggtgaagcaaacgctaggtagcggaagctactcaaaggtaaaatttgcccattgctttaattttgaaagagaaaat gctgctgtcaaaattgtagatagacacaaggcgcccaaggatttccaacatcgttttcttccccgtgaaattgaaatttg gccaaagctacgacatccacacattgtccgtctgctagacatatttgaggacagtcgtagggtttatatgattttagagt atggagaaaatggggatgtccttcgctatatccaacgttcgggtgccatcaaagaacccatggcaagagattggctcaga caaatatgtgatgctgttcgctatcttcatgaaatgaacataactcacagggacttaaaattggaaaatttgctattaga tgcgtcctataatataaaaatctgcgattttggatttgtgaaagaggatcataaccgagatctaagccatacttattgcg gttcaaaatcatatgctgcacccgagattctgaaaggggaaccttacgatcctaggaaagcggatatatgggccatcgga gttatactgtacatctttgtaaccggaaaaatgccatttgatgagagcaagggtaaccatggtgttctagaggagcatag gaaactgacattcccgtggcaaaaattgcgcagggctgtgtctgaggagtgtaaatccttgattctctggaccttccgat atgattacaacgatcgtcccgatatttatgatatactgagcagtccatggttcagatcggaaaataaagctaaactccct gatgtccccaatatggagggacccactacaaagcctgagaagactgaacaagattccagcgcccaaaatacgaaatcttc caaacgtgatcaagaaagtcgttga |
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Protein
| Protein ID | pfu_aug1.0_5888.1_09232.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5888.1_09232.t1 MGDDASSRSRSLQKELEVMQSEVEAVEIRRSPNDKTESVKYRPTYRAILANRGFLVKQTLGSGSYSKVKFAHCFNFEREN AAVKIVDRHKAPKDFQHRFLPREIEIWPKLRHPHIVRLLDIFEDSRRVYMILEYGENGDVLRYIQRSGAIKEPMARDWLR QICDAVRYLHEMNITHRDLKLENLLLDASYNIKICDFGFVKEDHNRDLSHTYCGSKSYAAPEILKGEPYDPRKADIWAIG VILYIFVTGKMPFDESKGNHGVLEEHRKLTFPWQKLRRAVSEECKSLILWTFRYDYNDRPDIYDILSSPWFRSENKAKLP DVPNMEGPTTKPEKTEQDSSAQNTKSSKRDQESR |
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