Gene
Gene Model ID | pfu_aug1.0_5888.1_09232 |
---|---|
Locus | scaffold5888.1 : 7508 ... 10785 : - |
To GenomeBrowser | scaffold5888.1:7508..10785 |
Genes list of scaffold | scaffold5888.1 |
Synonym | pfu_aug2.0_1588.1_28393 |
Manual annotation
Study field | Reproduction |
---|---|
Gene name | testis-specific serine/threonine kinase1 |
Description | Best hit to HQ678180 (Mytilus edulis).323 bits, 5e-86 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5888.1_09232.t1 | 1 | 1 | Pkinase | 56 | 311 | 0.0 | 234.1 | 0.0 | 0.0 | 233.8 |
pfu_aug1.0_5888.1_09232.t1 | 1 | 1 | Pkinase_Tyr | 57 | 306 | 6.1e-39 | 133.6 | 2.90069e-42 | 8.7e-39 | 133.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5888.1_09232.t1 | gi|343455234|gb|AEM36057.1| | putative testis-specific serine/threonine kinase [Mytilus edulis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
maleGonad | 1 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_5888.1_09232.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5888.1_09232.t1 atgggcgacgatgcttcctcgcgatcaagaagtctgcaaaaagaacttgaagtgatgcagagcgaagttgaagccgtcga aatcagaaggtcgccgaatgacaagacagagtctgtaaagtacagaccaacgtatagggccattctagccaacaggggct ttctggtgaagcaaacgctaggtagcggaagctactcaaaggtaaaatttgcccattgctttaattttgaaagagaaaat gctgctgtcaaaattgtagatagacacaaggcgcccaaggatttccaacatcgttttcttccccgtgaaattgaaatttg gccaaagctacgacatccacacattgtccgtctgctagacatatttgaggacagtcgtagggtttatatgattttagagt atggagaaaatggggatgtccttcgctatatccaacgttcgggtgccatcaaagaacccatggcaagagattggctcaga caaatatgtgatgctgttcgctatcttcatgaaatgaacataactcacagggacttaaaattggaaaatttgctattaga tgcgtcctataatataaaaatctgcgattttggatttgtgaaagaggatcataaccgagatctaagccatacttattgcg gttcaaaatcatatgctgcacccgagattctgaaaggggaaccttacgatcctaggaaagcggatatatgggccatcgga gttatactgtacatctttgtaaccggaaaaatgccatttgatgagagcaagggtaaccatggtgttctagaggagcatag gaaactgacattcccgtggcaaaaattgcgcagggctgtgtctgaggagtgtaaatccttgattctctggaccttccgat atgattacaacgatcgtcccgatatttatgatatactgagcagtccatggttcagatcggaaaataaagctaaactccct gatgtccccaatatggagggacccactacaaagcctgagaagactgaacaagattccagcgcccaaaatacgaaatcttc caaacgtgatcaagaaagtcgttga |
Protein
Protein ID | pfu_aug1.0_5888.1_09232.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5888.1_09232.t1 MGDDASSRSRSLQKELEVMQSEVEAVEIRRSPNDKTESVKYRPTYRAILANRGFLVKQTLGSGSYSKVKFAHCFNFEREN AAVKIVDRHKAPKDFQHRFLPREIEIWPKLRHPHIVRLLDIFEDSRRVYMILEYGENGDVLRYIQRSGAIKEPMARDWLR QICDAVRYLHEMNITHRDLKLENLLLDASYNIKICDFGFVKEDHNRDLSHTYCGSKSYAAPEILKGEPYDPRKADIWAIG VILYIFVTGKMPFDESKGNHGVLEEHRKLTFPWQKLRRAVSEECKSLILWTFRYDYNDRPDIYDILSSPWFRSENKAKLP DVPNMEGPTTKPEKTEQDSSAQNTKSSKRDQESR |