Gene
| Gene Model ID | pfu_aug1.0_5888.1_09233 |
|---|---|
| Locus | scaffold5888.1 : 10886 ... 12733 : + |
| To GenomeBrowser | scaffold5888.1:10886..12733 |
| Genes list of scaffold | scaffold5888.1 |
| Synonym | pfu_aug2.0_1588.1_28392 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | Testis-specific serine/threonine kinase |
| Description | Best hit to HQ678180 (Mytilus edulis).248 bits, 4e-64. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5888.1_09233.t1 | 1 | 1 | Pkinase | 5 | 189 | 0.0 | 188.6 | 0.0 | 0.0 | 188.3 |
| pfu_aug1.0_5888.1_09233.t1 | 1 | 1 | Pkinase_Tyr | 7 | 183 | 1.5e-28 | 99.6 | 6.0e-32 | 1.5e-28 | 99.6 |
| pfu_aug1.0_5888.1_09233.t1 | 1 | 1 | Kinase-like | 41 | 177 | 6.0e-10 | 38.5 | 5.3e-13 | 1.3e-09 | 37.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5888.1_09233.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5888.1_09233.t1 atgcatacaatagatccgtcggtatatcttattatggaacatgctggtcatggcgaccttcttgaatacataaagcttcg cggagcacttccggatgaaagggccaaaacaatgttcaaacagatcgtgaatgctgtggagtatcttcatcaaaacagca ttgtccatagagacttgaagtgcgaaaaccttttattggacacaatgagcaatatcaaagtatcagattttggattttgt cggtccattgaaccgggagatctttgtaaaacttactgcggaagtgctgcctacgcagctccggaaatattacagggaat tccatattttggacctatgcatgacatctggagcatcggtgtcattctgtatattatggtttgtgctgcgatgccgtacg acgattccaacataaaaaagatggtcagggagcagttagagcggaaagtgtccttttcaaaatctaagaaagtttctccg gaatgtaaagacttgatatacagaattcttgaagtaaactctaaaaggcgtttaacaatacctcaaatgatgtaccatcc ttggctaaaggagccagcgaaggaggccacaacctcccactccgtaaagaacatgcaacgccaagaggaaatgcaggaag cttccgatgcattaaaggcagagttaggtacaggggtaaggccaaagaccccaggaaatgccaagtcctga |
|
Protein
| Protein ID | pfu_aug1.0_5888.1_09233.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5888.1_09233.t1 MHTIDPSVYLIMEHAGHGDLLEYIKLRGALPDERAKTMFKQIVNAVEYLHQNSIVHRDLKCENLLLDTMSNIKVSDFGFC RSIEPGDLCKTYCGSAAYAAPEILQGIPYFGPMHDIWSIGVILYIMVCAAMPYDDSNIKKMVREQLERKVSFSKSKKVSP ECKDLIYRILEVNSKRRLTIPQMMYHPWLKEPAKEATTSHSVKNMQRQEEMQEASDALKAELGTGVRPKTPGNAKS |
|