Gene
| Gene Model ID | pfu_aug1.0_5890.1_16790 |
|---|---|
| Locus | scaffold5890.1 : 8114 ... 27665 : - |
| To GenomeBrowser | scaffold5890.1:8114..27665 |
| Genes list of scaffold | scaffold5890.1 |
| Synonym | pfu_aug2.0_68.1_26771 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5890.1_16790.t1 | 2 | 1 | AIF_C | 116 | 150 | 1.5e-33 | 115.8 | 0.076 | 140.0 | 2.6 |
| pfu_aug1.0_5890.1_16790.t1 | 2 | 1 | Pyr_redox_2 | 163 | 288 | 2.2e-15 | 57.0 | 8.2e-11 | 1.5e-07 | 31.4 |
| pfu_aug1.0_5890.1_16790.t1 | 2 | 1 | Pyr_redox | 246 | 271 | 1.0e-07 | 32.2 | 0.41 | 760.0 | 0.6 |
| pfu_aug1.0_5890.1_16790.t1 | 1 | 1 | RVT_1 | 447 | 554 | 2.5e-08 | 33.5 | 3.4e-11 | 6.3e-08 | 32.2 |
| pfu_aug1.0_5890.1_16790.t1 | 2 | 2 | Pyr_redox_2 | 901 | 1081 | 2.2e-15 | 57.0 | 5.5e-08 | 0.0001 | 22.2 |
| pfu_aug1.0_5890.1_16790.t1 | 2 | 2 | Pyr_redox | 941 | 1012 | 1.0e-07 | 32.2 | 1.1e-09 | 2.1e-06 | 28.0 |
| pfu_aug1.0_5890.1_16790.t1 | 2 | 2 | AIF_C | 1104 | 1205 | 1.5e-33 | 115.8 | 2.8e-35 | 5.2e-32 | 110.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5890.1_16790.t1 | gi|115612003|ref|XP_001202402.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 5 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 2 |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_5890.1_16790.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5890.1_16790.t1 atggtcagtcctccaccgcagatatgtgctcgttgcctaagccatctaagtaacatcaagtcaaacggcaatgacaagtc ctggaatagacatggcagcaccaacagggggcagtacaggtacaagtcaactgagggtggcaagaatcgttgctacggac agtacattatgggaggcatagctgtaatagctggagggatatttgtattgacagaaggttcatggttcatcaattattat attcgaggcaatcgtcatcataagaaggatgacagtccaatccaggtgtcgccacatcccctagctatccaggcctcgga ggaactgacccagaaagagaaagaggagatagcagccacagcggtggggagtgtcgacagtacgtttgtgaccacaccag tcactgtgtccgaggattctaaagagaagaaaacagaggctgcaacaacgccagaagaagaattcccaaaacacattcca tacctactgataggagggggaacaacctctgttggcgcatatagagccataaaagcaaaagaccctaaggcaaagatatt ggtgataagtcaagaagatacggtaccatatttccgtcctccactatctaaagaattgtggtttgttgatgacagagaat tggccaagaaatacacgtttaaagactggaatggtaaacagaagacagtattctatgagccacgtccattttactataca cctcagggagtgatgaaggcagaaaatggtggtgtggccttattgtcaggcaagaaggtgataaagattaaccccaataa aaagacagtctacattgatgatgggaaagagataacatatgacaaatgtctcatagctacagtatataagcgcacaaaac gcagcttcagaaacgcattgaacgcggaacacgaaaaatttatgcttgaagcatacagagatatcgacgaggccgcagaa tgtgacatccgactgttttggcgtctagtaaaagcacagaagcctcgcgcatcccgaatttaccccgagatttgcgaagc cggtgtaaattacgatacaccggatggcgtggcagaagcattcacatctttctttgaaaagttatattctccattgacag acgatgattttgacgataagtttaaggagaatattgaagaacagtatgcccatttgaagtcagaccatattaacaatgat atctatcttcctggtggccctatcacaaatgacgatgtcaaaaacgtaataaaacaactcaaacgccgaaaagcaccagg ggatgacggcattacgaatgagcatatcattttcgatgattgtcatttagataccgaaagctgtattgttgttaataatg ccaaatctagatggtttaaggtggatcaaggagtaaggcaaggtggagtgttatcaacatttttgtacttgacctttatc aatgatttaattgatgagatacagtcaactagccataattcaggcaaattaggtattccaagcagttgccctacacatgc tgacgatatttcaatgattgcgatttacccaaggtctctacaagacatgcttaatattgcgtacacgtattcatgtaagt ggcgctttaagttcaacgcccaaaaatcctgcgtcatcaaatttcgtgctactggtgcaaaaatggaagaactttcctgg aatttgggtggtgttgaattacctgtagaaatcagttgtactcacctcggaatagtgattaaccagaaatgtaactgttc agaccgcattaatcttgcatgttcgaaaggcaggagaacatacttctcactcgcagatatcggctcatcatacttaaacc caatgactatctcgcatttatataaaaccgttgttcaaccaacaattcgatatgggtgcgagctatggaccaacctcact aagcaagattttcaaaaactgcaaactctacagcattttgtctgcaaaaatgccatgcaattacctactcgatgtagatc tgacatttgcgaatcacttttcgacattcttccgattcattccgaaatagacagaaggaagttactcttttttggacgga tgtgtaaaatgagtaccgaatctctcccgaaagaagtattcctagcaagattattttcatactgtgaacacatttcatca tctcaacgtggtttcattcctgatattcttaaagttctggcttcatacgatttactgtcttatctcacacaatggcttca tgatggactttttccggacaaaaaatcttggaagaggattgtaaaaggcacaatcactcagtcccagatacgggatagaa atattcgaatggaaaatgatgatgacttttttacatttcgagttatttttgcagactcaaattctcattttatttggaga cttccatctaactcacatgaactccaattatgtaaatttgtttgcaaacttattgccacaggctgcaaaactatgcgaga aagcttcatttgtcaactctgcaacaatgttttcaccgatgtttttcaacatgcagctatcaattgtccgttcacgctac acatcagagacctatggtggcaggatgttattaacctaccagatataaggatatgcgcagaactatcagggctttcagac acagatctctatatgacccttatgggacgccgtattgttaccccgattgaccaaagaggtggaagacccagaagtttacc cacaatagagaaagcatctcaggaagttaaggataggacagtattattcagaacactttcagacttcagcaaacttgagg acatggtccagaagtccaagtctgtagcaatcatcggagggggtttccttggtagtgagttggcctgtgctctgggattt accggaatgcagactggaatgaaagtttatcaggtttttcctgaagatggtaatcttggtgcagtattacccaaatatct tagcaagtggacctctagtaagatatcacaaattggtgtagatataatgcctaggaattttgtaaatgatgcagccttca aggatggacaggttcagctaacattatcaagtggctcaaagatatctgtagataatgtggttgtagcagtaggcttgcag ccaaacacagagctagctaagacatcagggctggaggtcgacgaaaatcacggaggattccgtgtcaatgctgaactgga ggctcgatcagatatctgggtggctggtgatgcgtcatgcttctatgacatcaagcttggccgtagacgtgttgagcatc atgaccacgccatggttagtggacgactggcaggagaaaacatgaccggagcagccaagccttactggcaccagtctaca ttctggtcagatttgggaccaactataggttttgaggctattggtataatagactcagaactggaaacagtagcagtatt tgacaaggccaccaaggaagcaatagaaggtcaaactggacaaaagctcaaggactcgactcccagccaaggaaaggaag ggacggtagacaagaagcctgagctgactgtacctggagataatgaggagtatggcaaaggtgtgttattctacctgaaa gataaggagatcattgacgatgtccgtctgtccgtccgtctgtccgtccgtctgtccgtccgtctgccgtcaacattttg gttaaagtttctggttgaggcaaaatctaaggaactatatgcagtagaaactttatattatacatga |
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Protein
| Protein ID | pfu_aug1.0_5890.1_16790.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5890.1_16790.t1 MVSPPPQICARCLSHLSNIKSNGNDKSWNRHGSTNRGQYRYKSTEGGKNRCYGQYIMGGIAVIAGGIFVLTEGSWFINYY IRGNRHHKKDDSPIQVSPHPLAIQASEELTQKEKEEIAATAVGSVDSTFVTTPVTVSEDSKEKKTEAATTPEEEFPKHIP YLLIGGGTTSVGAYRAIKAKDPKAKILVISQEDTVPYFRPPLSKELWFVDDRELAKKYTFKDWNGKQKTVFYEPRPFYYT PQGVMKAENGGVALLSGKKVIKINPNKKTVYIDDGKEITYDKCLIATVYKRTKRSFRNALNAEHEKFMLEAYRDIDEAAE CDIRLFWRLVKAQKPRASRIYPEICEAGVNYDTPDGVAEAFTSFFEKLYSPLTDDDFDDKFKENIEEQYAHLKSDHINND IYLPGGPITNDDVKNVIKQLKRRKAPGDDGITNEHIIFDDCHLDTESCIVVNNAKSRWFKVDQGVRQGGVLSTFLYLTFI NDLIDEIQSTSHNSGKLGIPSSCPTHADDISMIAIYPRSLQDMLNIAYTYSCKWRFKFNAQKSCVIKFRATGAKMEELSW NLGGVELPVEISCTHLGIVINQKCNCSDRINLACSKGRRTYFSLADIGSSYLNPMTISHLYKTVVQPTIRYGCELWTNLT KQDFQKLQTLQHFVCKNAMQLPTRCRSDICESLFDILPIHSEIDRRKLLFFGRMCKMSTESLPKEVFLARLFSYCEHISS SQRGFIPDILKVLASYDLLSYLTQWLHDGLFPDKKSWKRIVKGTITQSQIRDRNIRMENDDDFFTFRVIFADSNSHFIWR LPSNSHELQLCKFVCKLIATGCKTMRESFICQLCNNVFTDVFQHAAINCPFTLHIRDLWWQDVINLPDIRICAELSGLSD TDLYMTLMGRRIVTPIDQRGGRPRSLPTIEKASQEVKDRTVLFRTLSDFSKLEDMVQKSKSVAIIGGGFLGSELACALGF TGMQTGMKVYQVFPEDGNLGAVLPKYLSKWTSSKISQIGVDIMPRNFVNDAAFKDGQVQLTLSSGSKISVDNVVVAVGLQ PNTELAKTSGLEVDENHGGFRVNAELEARSDIWVAGDASCFYDIKLGRRRVEHHDHAMVSGRLAGENMTGAAKPYWHQST FWSDLGPTIGFEAIGIIDSELETVAVFDKATKEAIEGQTGQKLKDSTPSQGKEGTVDKKPELTVPGDNEEYGKGVLFYLK DKEIIDDVRLSVRLSVRLSVRLPSTFWLKFLVEAKSKELYAVETLYYT |
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