Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_59.1_43442
Locus scaffold59.1 : 4983 ... 13965 : -
To GenomeBrowser scaffold59.1:4983..13965
Genes list of scaffold scaffold59.1
Synonym pfu_aug2.0_701.1_04496

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_59.1_43442.t1 gi|156379514|ref|XP_001631502.1| predicted protein [Nematostella vectensis] 2.0e-26

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_59.1_43442.t1
Definition-
>pfu_aug1.0_59.1_43442.t1
atggagaattttgtttacaatgaaaaggatttgtgtacatcagtatcaagctgggatagcaatgaaaaacttagcaagtt
tgattgccttttgagaagtaaatgggacagagcaatggtggaaggtcatttcagatatcaactagataacctagaaacga
gaataattcctggaaagaagaaatttgtagcacagttgaatgttaaaagggccactgagaggaggaaaccacaagctata
agtacagtcaatcagagttttgatcctaatcagttcaacttcacaaaaatcaaacaagaagaagttctcttcagtctacg
ccaatctgatgaatctcaaaataacttcaatgaaactagttctctgggaaatcaggttgtgttttcgttaaggttttag

Protein
Protein IDpfu_aug1.0_59.1_43442.t1
Definition-
>pfu_aug1.0_59.1_43442.t1
MENFVYNEKDLCTSVSSWDSNEKLSKFDCLLRSKWDRAMVEGHFRYQLDNLETRIIPGKKKFVAQLNVKRATERRKPQAI
STVNQSFDPNQFNFTKIKQEEVLFSLRQSDESQNNFNETSSLGNQVVFSLRF

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