Gene
| Gene Model ID | pfu_aug1.0_59.1_43451 |
|---|---|
| Locus | scaffold59.1 : 174436 ... 186228 : + |
| To GenomeBrowser | scaffold59.1:174436..186228 |
| Genes list of scaffold | scaffold59.1 |
| Synonym | pfu_aug2.0_237.1_23731 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_59.1_43451.t1 | 2 | 1 | p31comet | 14 | 158 | 7.5e-11 | 41.3 | 3.8e-11 | 2.8e-07 | 29.6 |
| pfu_aug1.0_59.1_43451.t1 | 2 | 2 | p31comet | 273 | 289 | 7.5e-11 | 41.3 | 4.2e-05 | 0.31 | 9.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_59.1_43451.t1 | gi|291242963|ref|XP_002741347.1| | PREDICTED: MAD2L1-binding protein-like [Saccoglossus kowalevskii] | 1.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_59.1_43451.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_59.1_43451.t1 atgaaaatgaaatatagaagaagaagaattcatcaaacgcacaaatattccaaagaagctgtaacgaatccatcagtgaa cagaatgcagctacgacgggatacactccgaatgaagagggcaattaaggccatcagtaatttgcagcaaatgtttaagg agatttctgccgtgtttgaacagtgcccagaaatcaaacaagtcatgcttgtactgggtagcacaacaattagtcctaag gaatcttacctgatcaacttaccaccaccgaacccagaggctgataacctggcactgaaaaactgcactagaagtctttt cagacaattgatcatgcaagattttctcaacggggcaaagtccatttcacccacttcattatcggtattggtgaccgctc caaggacgatggaaatgtcatggtttctaccaaataaaagcttcaagtcaccgctgcgtggagaaaaatttgtgtttgat tttgtaaacaacgtaggatcacacgatcaaagtgtaatgggttctcatgatattgatatgtcgggtatcgagcctttaga gtcttcggtgatagatctatctgtaatcaataaagcagagcaactactggacttgacaaacacaagtagtagttctatga catcagaggatgttgattcaactcggagtttattgagacaattcagcgactctgagctttcatctaaaacatcctcctct ttaaattcatcgactgttacgtcaggatacaaatatgacagcatgtcatcagagagggattgttctcatgatgaaatgct acaggaaaatggagaagataacatgtacatgtggtttcaagcccctataaggtttaaggggtacaaatgtaaacaaaaat aa |
|
Protein
| Protein ID | pfu_aug1.0_59.1_43451.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_59.1_43451.t1 MKMKYRRRRIHQTHKYSKEAVTNPSVNRMQLRRDTLRMKRAIKAISNLQQMFKEISAVFEQCPEIKQVMLVLGSTTISPK ESYLINLPPPNPEADNLALKNCTRSLFRQLIMQDFLNGAKSISPTSLSVLVTAPRTMEMSWFLPNKSFKSPLRGEKFVFD FVNNVGSHDQSVMGSHDIDMSGIEPLESSVIDLSVINKAEQLLDLTNTSSSSMTSEDVDSTRSLLRQFSDSELSSKTSSS LNSSTVTSGYKYDSMSSERDCSHDEMLQENGEDNMYMWFQAPIRFKGYKCKQK |
|