Gene
| Gene Model ID | pfu_aug1.0_5904.1_52645 |
|---|---|
| Locus | scaffold5904.1 : 2993 ... 6022 : + |
| To GenomeBrowser | scaffold5904.1:2993..6022 |
| Genes list of scaffold | scaffold5904.1 |
| Synonym | pfu_aug2.0_1626.1_21722 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5904.1_52645.t1 | 3 | 1 | zf-B_box | 17 | 60 | 2.7e-10 | 39.9 | 2.1e-07 | 0.00062 | 19.6 |
| pfu_aug1.0_5904.1_52645.t1 | 3 | 2 | zf-B_box | 76 | 111 | 2.7e-10 | 39.9 | 1.2e-09 | 3.6e-06 | 26.7 |
| pfu_aug1.0_5904.1_52645.t1 | 3 | 3 | zf-B_box | 299 | 311 | 2.7e-10 | 39.9 | 0.0056 | 17.0 | 5.4 |
Transcript
| Transcript ID | pfu_aug1.0_5904.1_52645.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5904.1_52645.t1 atgtcttcctccgtcgaaaaagacattgcttggcaagaagtggttgctgctcgatgtgatttgtgtgcaaaagaggatga cgtagacgatttttgtagagaatgtcatcaatatttgtgcgcaacatgcaaagtgcaacatttacgaacaacatattgca tgaatcatagaattgtttctaaatcagaaggatataagctagatcatgtccagaaagctgcatgtctttgtaatgaccac aatgagccgtttattgtcttttgtcgaacttgtggacatcacatttgcactaaatgccttacaaataaacacaacggtca ccattatgaggacattgatacatttgctgacgaattgcataacagagtgaagaaacaaattcaacaaaagacagacgaag ctaacgacactaaacgaatgctcaccgaatatagcaaatcctgcaattatgcaataacaaagtgcgatgaaagcattgcg tcgctagaacatgtagttgcagatttgataaatgatgtaaaattgatagaaaatgcaatgaaaaaaagaatttctagaag aaaatctgagctagtggcaagcgaaaccttgtaccaggaaaggctatcagcagtgactgctatcggaaggaggacggctg acctagaacgggaaagacaaaatcagtctaatgtatctatcgttggctttatggaaccagcgcaagaagagttaaaaacg ttaactattccaaagtttcctctttccttattgatgagtcctattgaatttatccctggaaatacaactgtagagaaact acaacaggtggtgggagatctcagatttcaaggatatcatttcaaaggatttgctacacatgtaatttgctccgaaatgg aagggagatcagacctactcagcttttgcaatacagatgatgcttgtctttgtttgtgcgtaacagattattcacaaagc aaactagtgaaaataaaactcgataaatctgtcataagtgaattacatttaccatcagttccattttcacttcagcaagc tgatgggggcaatatagtggcttcttttaacaatgaaacaatcgaactcttgaatttaagagacaagactgtgacaacat tatactcaaccacaaatacagttttgggagacgttgtggttacaaaagacaatgacttcctggtggctgtttggaataaa agagatcgtcccatcatccatcatcttgacaaacatgggaaacttattaaagagatatttatcggcgaaggacttcatct tgaagatgtttcaaacattcaacgcttagtgccatatacgaaaggtggatatcttttgcttatgcaaaacaacaaggtct acaaaatggactgtaactgcaaaatatcacagcctttgatacatgaaaaagcaatggaagtaacaagaatagctagtgat aacaatggctttgtcatatgttgtgataaaaaaggaagtatgaatgtttttgacgaggatggtggaatgcttcatgcata tgagatgcttcaaatcgcaaaccgggacaaaataaactgcataactgtagacaaagaagataacttgatagttgggacaa tgagaggggatgtatttgtctataccacacgtaatggcatcataagctag |
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Protein
| Protein ID | pfu_aug1.0_5904.1_52645.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5904.1_52645.t1 MSSSVEKDIAWQEVVAARCDLCAKEDDVDDFCRECHQYLCATCKVQHLRTTYCMNHRIVSKSEGYKLDHVQKAACLCNDH NEPFIVFCRTCGHHICTKCLTNKHNGHHYEDIDTFADELHNRVKKQIQQKTDEANDTKRMLTEYSKSCNYAITKCDESIA SLEHVVADLINDVKLIENAMKKRISRRKSELVASETLYQERLSAVTAIGRRTADLERERQNQSNVSIVGFMEPAQEELKT LTIPKFPLSLLMSPIEFIPGNTTVEKLQQVVGDLRFQGYHFKGFATHVICSEMEGRSDLLSFCNTDDACLCLCVTDYSQS KLVKIKLDKSVISELHLPSVPFSLQQADGGNIVASFNNETIELLNLRDKTVTTLYSTTNTVLGDVVVTKDNDFLVAVWNK RDRPIIHHLDKHGKLIKEIFIGEGLHLEDVSNIQRLVPYTKGGYLLLMQNNKVYKMDCNCKISQPLIHEKAMEVTRIASD NNGFVICCDKKGSMNVFDEDGGMLHAYEMLQIANRDKINCITVDKEDNLIVGTMRGDVFVYTTRNGIIS |
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