Gene
| Gene Model ID | pfu_aug1.0_59063.1_27452 |
|---|---|
| Locus | scaffold59063.1 : 1 ... 4003 : - |
| To GenomeBrowser | scaffold59063.1:1..4003 |
| Genes list of scaffold | scaffold59063.1 |
| Synonym | NA |
Manual annotation
| Study field | other |
|---|---|
| Gene name | hypothetical protein |
| Description | similar (22%) to XP_002605637.1| hypothetical protein BRAFLDRAFT_232832 [Branchiostoma floridae |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_59063.1_27452.t1 | 1 | 1 | 7tm_1 | 3 | 269 | 4.1e-21 | 75.2 | 7.3e-25 | 5.4e-21 | 74.8 |
Transcript
| Transcript ID | pfu_aug1.0_59063.1_27452.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_59063.1_27452.t1 tcgccagttgtttggccttagtggtgtctttgacgccagtttttggatggtcacagatatggtataacccaaatcagtac atctgtattaatgactgggccaacagcaagtccttctctaagttcttcatcgttgggtgctttggtacccccttggttgt catgctggtctgcaatacattgatccttcgtcagattcggagaaacaacacccgagtagacagaagaagcagaattcgac tgagcacactggtacagtcaatatctggactcacggtacgaccacacctagcaattatcaacgccaggggaggagcaaga cggcaagatgagattccattggaggatacaagcgacctcaatgtcaatctgtcagtgacggtcaacgtacaatctatcga aacattagagagcataagcgatattacacacagggatgaccagggcgaaggaacacaaaacgggaaggacactgatggaa cagtaggacaaaacgaggagcaccatgaacggacagagaaaaggagcgacgctgccggaatgagaaagtccagcaaagaa tctaccacggtagctatgccaaggtccgttcatcatggcagtaacgttacaaattcagggctacagaaacttcatgagct tcgtcttcgacggatgttattcgttgccccaatcatgtacaccatattctggacgccattttgtttgagcgtcctgacgt cagtgtactcggagaagaacatgactatctttcactgtctgactttactgattggttacctgaattgctgtgtaaatccg gttacttacggacttttgaatacaaactttaaccggaagtgtagggatttctgtagtcgaaagtctagtgcttga |
|
Protein
| Protein ID | pfu_aug1.0_59063.1_27452.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_59063.1_27452.t1 ASCLALVVSLTPVFGWSQIWYNPNQYICINDWANSKSFSKFFIVGCFGTPLVVMLVCNTLILRQIRRNNTRVDRRSRIRL STLVQSISGLTVRPHLAIINARGGARRQDEIPLEDTSDLNVNLSVTVNVQSIETLESISDITHRDDQGEGTQNGKDTDGT VGQNEEHHERTEKRSDAAGMRKSSKESTTVAMPRSVHHGSNVTNSGLQKLHELRLRRMLFVAPIMYTIFWTPFCLSVLTS VYSEKNMTIFHCLTLLIGYLNCCVNPVTYGLLNTNFNRKCRDFCSRKSSA |
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