Gene
| Gene Model ID | pfu_aug1.0_5920.1_23918 |
|---|---|
| Locus | scaffold5920.1 : 13054 ... 21795 : - |
| To GenomeBrowser | scaffold5920.1:13054..21795 |
| Genes list of scaffold | scaffold5920.1 |
| Synonym | pfu_aug2.0_2118.1_28680 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5920.1_23918.t1 | 1 | 1 | TFIID_20kDa | 84 | 150 | 1.8e-28 | 98.6 | 1.3e-31 | 2.5e-28 | 98.1 |
| pfu_aug1.0_5920.1_23918.t1 | 1 | 1 | CBFD_NFYB_HMF | 84 | 142 | 5.4e-06 | 26.3 | 4.4e-09 | 8.1e-06 | 25.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5920.1_23918.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5920.1_23918.t1 atgctgttaccggtagttgttgtgcactgtgcggtcaactttaaaaaacgtcaaaatatgaaatcccgtctcacatatat cggaacaagtcaaacgatgaacaagttaccaggacaagatgggatacctttggtgggtgtgtcgtccccctcactgggaa ttcagcagccacagcccgtcaccctcaggcagtcagcaccctcttctatcccaagcagcagtacccagggggagagtaag gtgctggacaaaaggcggatccaggaacttgtcaaagaggtggatcctatggaacagctggatgaggaagtagaggaggc tttgctgagcatagcagatgattttatagacagcgtagtgacggctgcatgtcaaatagccaaacatagaaagtccaata ccctggaggtcaaggacgtacagcttcatctagcgaattttcaaaatatgacctatgagttaaatgatgcaaaatgtttt cgatgggttaagaattag |
|
Protein
| Protein ID | pfu_aug1.0_5920.1_23918.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5920.1_23918.t1 MLLPVVVVHCAVNFKKRQNMKSRLTYIGTSQTMNKLPGQDGIPLVGVSSPSLGIQQPQPVTLRQSAPSSIPSSSTQGESK VLDKRRIQELVKEVDPMEQLDEEVEEALLSIADDFIDSVVTAACQIAKHRKSNTLEVKDVQLHLANFQNMTYELNDAKCF RWVKN |
|