Gene
| Gene Model ID | pfu_aug1.0_594.1_00408 |
|---|---|
| Locus | scaffold594.1 : 1 ... 46948 : + |
| To GenomeBrowser | scaffold594.1:1..46948 |
| Genes list of scaffold | scaffold594.1 |
| Synonym | pfu_aug2.0_58.1_26759 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_594.1_00408.t1 | 1 | 1 | WH1 | 5 | 109 | 9.4e-12 | 44.6 | 2.1e-15 | 1.5e-11 | 43.9 |
| pfu_aug1.0_594.1_00408.t1 | 1 | 1 | Sprouty | 326 | 431 | 2.0e-35 | 121.0 | 4.6e-39 | 3.4e-35 | 120.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_594.1_00408.t1 | gi|15743556|ref|NP_277058.1| | sprouty-related, EVH1 domain-containing protein 2 [Mus musculus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_594.1_00408.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_594.1_00408.t1 tgacgaattcctggtccgagttcaagcccaggtgatgactcgggacgattccactgggggctgggttccaatgggtgggg gaggactaagcaatgttggcctcaggaaattggtgaaagccaacggagaggactaccataatgaatatcttatatatgga gaacgtatagcagacaaatcagttgtattagattgcttattaaagagagaccttaaatatgtaaaggccaaccccaaatt tcatcactggacaacagacgataaaaaatttggacttacgtttgagcgctgtgttgatgcgtcaaaatttgacaaaggca tccggagtgctgttgcagatctcgttgacggtaaaaacgaattgtgtccagaaggagacgaagaagtttttgcgatactg acgcttcctttatcatccagaggaacgtcttcctcgcagagtgcaagtaccacttcaactacgacgagtagccccacagc tcagtctcccacttctaatttctcaggagttccttcagaatatcatatcacaaatgcaaatcatcctcatgttcatcgga ttcagtacatctccagcacttcatcaccccatcatctaccatccacgcataaaaaaccaccctctcctcccagtgataaa agtagttccggcaagtcggaaatagtagactctagtagttacggacaggacctttggatcaaatcccccgatgatccacc atcgttaggttctaagtctgatcagggattgttagacgcccaatctgaagtggaacttcaagaatattcttacgttattt ttgccaaaaataagcctcaaaaacctcatgaatatagttacccgactttagaggcagtgcaaaagcctccctccaaacgg gaggctactagtaatgttaaacgtcaacctttaattcaacagactcaaccaccgttacccaaaaagaaagggaaaaaaca aagattaataacaacaaaatctaggtgcaaacattgccatgaaatgttttcacatgaagataattttagagggagttgtg aggacgcacctgatggtgtagagaagtgtatagagtatgtgacttgtgtatgttgtatgcggggcctgatataccactgt atgtcggaccctgatggggactacggccatccttgcaaatgtgaccccagtgataactcaaactgtaaaaagtggactgc tttaacaatcttgtcactatttgttccatgtttgtggtgctacttgccgctaatggcatgtcacaagtgtggtgtggcct gcagttgctgcggcggccgtcacaaagcggtctaa |
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Protein
| Protein ID | pfu_aug1.0_594.1_00408.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_594.1_00408.t1 DEFLVRVQAQVMTRDDSTGGWVPMGGGGLSNVGLRKLVKANGEDYHNEYLIYGERIADKSVVLDCLLKRDLKYVKANPKF HHWTTDDKKFGLTFERCVDASKFDKGIRSAVADLVDGKNELCPEGDEEVFAILTLPLSSRGTSSSQSASTTSTTTSSPTA QSPTSNFSGVPSEYHITNANHPHVHRIQYISSTSSPHHLPSTHKKPPSPPSDKSSSGKSEIVDSSSYGQDLWIKSPDDPP SLGSKSDQGLLDAQSEVELQEYSYVIFAKNKPQKPHEYSYPTLEAVQKPPSKREATSNVKRQPLIQQTQPPLPKKKGKKQ RLITTKSRCKHCHEMFSHEDNFRGSCEDAPDGVEKCIEYVTCVCCMRGLIYHCMSDPDGDYGHPCKCDPSDNSNCKKWTA LTILSLFVPCLWCYLPLMACHKCGVACSCCGGRHKAV |
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