Gene
| Gene Model ID | pfu_aug1.0_595.1_65534 |
|---|---|
| Locus | scaffold595.1 : 20806 ... 33136 : + |
| To GenomeBrowser | scaffold595.1:20806..33136 |
| Genes list of scaffold | scaffold595.1 |
| Synonym | pfu_aug2.0_992.1_08069 |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | OTX |
| Description | BLAST best hits to NCBI AF440098.1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_595.1_65534.t1 | 2 | 1 | Homeobox | 59 | 115 | 3.0e-22 | 77.9 | 1.1e-25 | 7.9e-22 | 76.6 |
| pfu_aug1.0_595.1_65534.t1 | 1 | 1 | TF_Otx | 166 | 220 | 7.5e-10 | 38.9 | 1.0e-13 | 7.5e-10 | 38.9 |
| pfu_aug1.0_595.1_65534.t1 | 2 | 2 | Homeobox | 208 | 237 | 3.0e-22 | 77.9 | 0.66 | 4900.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_595.1_65534.t1 | gi|74100011|gb|AAZ99218.1| | orthodenticle-like protein [Octopus bimaculoides] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_595.1_65534.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_595.1_65534.t1 atgtctatggccagtatggcgtactcacagccgtcagtgctgccccctgtatccaaggctccttactctgtcaacggaat cagtttgtccgctccaaacgttgatctgatgcatccagcaatggggtatcctcctgacatgtatctatctacagccaaca acccccgcaaacagaggagggagcgtacaaccttcacccgcgcccagctggacgtactggagtccctcttccagaaaaca cgctaccccgacatcttcatgagggaggaagtggcactcaaaatcaatctacctgaatccagagtacaggtatggttcaa gaatagaagagctaagtgcagacagcaacagaaagctcaggacggtaaatccaaacctccaacaccaaagaaggccaaat cacctccccctccttcaacatcacccgtagactgcaaaccacccgccttcagtaacgccatgacaaatggtcccatgaac actcagtcaatatggagtccggcagccattcctcctgtcaacgacattctaaattccaatagctgtatgcagcgtggtgg ttatcccatgccaaacagtcacagcgccgcgtactctcaacaaccatacggtcattccagttactatggtaacatggact atttgaatcacatgcagcttccagtggtctcgaatcaaatgggacagtctgtaaacggcaaccaagtgtcttatggcgcc atgggggcacctcaaatttcccgcggaaaccactcagattgtctcgaatataaagacacatcatcatggcctaaattcca agttttgtga |
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Protein
| Protein ID | pfu_aug1.0_595.1_65534.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_595.1_65534.t1 MSMASMAYSQPSVLPPVSKAPYSVNGISLSAPNVDLMHPAMGYPPDMYLSTANNPRKQRRERTTFTRAQLDVLESLFQKT RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQKAQDGKSKPPTPKKAKSPPPPSTSPVDCKPPAFSNAMTNGPMN TQSIWSPAAIPPVNDILNSNSCMQRGGYPMPNSHSAAYSQQPYGHSSYYGNMDYLNHMQLPVVSNQMGQSVNGNQVSYGA MGAPQISRGNHSDCLEYKDTSSWPKFQVL |
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