Gene
Gene Model ID | pfu_aug1.0_5965.1_31091 |
---|---|
Locus | scaffold5965.1 : 14096 ... 16974 : + |
To GenomeBrowser | scaffold5965.1:14096..16974 |
Genes list of scaffold | scaffold5965.1 |
Synonym | NA |
Manual annotation
Study field | signal molecules |
---|---|
Gene name | Wnt16 |
Description | Blast hits to various animals Wnt16.Best hits to chicken, platynereis, chicken, and xenopus Wnt16 genes. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5965.1_31091.t1 | 1 | 1 | wnt | 1 | 149 | 0.0 | 193.2 | 0.0 | 0.0 | 193.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5965.1_31091.t1 | gi|343789239|gb|ADR81924.2| | wnt signaling molecule [Platynereis dumerilii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_5965.1_31091.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5965.1_31091.t1 atgaagttgaaatgtcgttgccatggggtatctggatcatgtgaaattcaaacgtgctggaagagtttagcaaactttag aacagttggaaacaaaattaaagaaaagtacgaaagatcagcaagaattcgtagaaaatccttgcgaagactaagacgtt tagaaaagacgaaaagaagagttcctatagataaacaggaacttgtttttgtgcacaagtcaccgaattattgtcgttcg aatcctcgaaagggaattcttggaacgcgaggccgggagtgtaataaaacatcgacaggctctgacagctgtgatcttct gtgctgtggtagggggtataatactcagatcgttcgttacgtagagagatgtcattgtaaatttatctggtgttgttacg tggaatgtaaaacgtgcgaaactttactggacaaacacacgtgcaagtga |
Protein
Protein ID | pfu_aug1.0_5965.1_31091.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5965.1_31091.t1 MKLKCRCHGVSGSCEIQTCWKSLANFRTVGNKIKEKYERSARIRRKSLRRLRRLEKTKRRVPIDKQELVFVHKSPNYCRS NPRKGILGTRGRECNKTSTGSDSCDLLCCGRGYNTQIVRYVERCHCKFIWCCYVECKTCETLLDKHTCK |