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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5965.1_31094
Locus scaffold5965.1 : 25118 ... 47854 : -
To GenomeBrowser scaffold5965.1:25118..47854
Genes list of scaffold scaffold5965.1
Synonym pfu_aug2.0_10511.1_06436

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5965.1_31094.t1 1 1 Fibrinogen_C 155 216 2.8e-07 30.3 6.3e-11 4.7e-07 29.6

Transcript
Transcript IDpfu_aug1.0_5965.1_31094.t1
Definition-
>pfu_aug1.0_5965.1_31094.t1
gatgataggacccgagctttgtgtgaaggaatgtgaacgtagaaggaccgagtgttcttctattaattatcagaaagcag
cgctggtttgtgagatgaacgctttaaaacctgcaaggaacagcgtggacatcaatttcaagtttgaggaagatccagga
tatttctttatcaatatctcatctattccaaattcagaagagcggaaaagaaactctttgattcagatgtacaaatataa
aaaacactttataatgaattcagacaatcgatccttacttttgtcgagaggaagcgtggtgtacatattagaaaagtcgt
atgaagaaatcagcagtgtcacaatattttgccacgtgttcattcttgtcgtgagtactgaagtcagatttctagataac
atcgtagcggagcagttgctagaattagcaatgtatcgaaatttgttgggagtcttgtgcaatttcggtaacgagtttct
tcatcatctcaccttgaatcgacctatgagactttaccttaaacttcaagcacaaaatggctcctggtataaggcaacct
atgaaggtttctatgtgggatctgagacggacaattttagactttacttcaatgaaacatcatacgacggaagagcgggt
tacaagtataagaaacctaatcacaatttcgtttttaactacaataaagttataaatacttga

Protein
Protein IDpfu_aug1.0_5965.1_31094.t1
Definition-
>pfu_aug1.0_5965.1_31094.t1
MIGPELCVKECERRRTECSSINYQKAALVCEMNALKPARNSVDINFKFEEDPGYFFINISSIPNSEERKRNSLIQMYKYK
KHFIMNSDNRSLLLSRGSVVYILEKSYEEISSVTIFCHVFILVVSTEVRFLDNIVAEQLLELAMYRNLLGVLCNFGNEFL
HHLTLNRPMRLYLKLQAQNGSWYKATYEGFYVGSETDNFRLYFNETSYDGRAGYKYKKPNHNFVFNYNKVINT

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