Gene
Gene Model ID | pfu_aug1.0_5975.1_59905 |
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Locus | scaffold5975.1 : 36746 ... 43810 : + |
To GenomeBrowser | scaffold5975.1:36746..43810 |
Genes list of scaffold | scaffold5975.1 |
Synonym | pfu_aug2.0_133.1_10319 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5975.1_59905.t1 | 1 | 1 | CAP_GLY | 525 | 583 | 2.8e-09 | 36.5 | 1.0e-12 | 4.9e-09 | 35.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5975.1_59905.t1 | gi|291230694|ref|XP_002735301.1| | 2.0e-30 |
Transcript
Transcript ID | pfu_aug1.0_5975.1_59905.t1 |
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Definition | - |
>pfu_aug1.0_5975.1_59905.t1 atgctactaaattcagttaaacaaaaagagagacgaatcagattcatcgaaaacttgagtttacaggttaagatcgacag actgctacaaaatcagagtgatgcgggacagaaactgtttaaatctaacgaactggtggaaaagttacggacagataata aaaagaaagtagaacaaatagaaaaactccagagggatatacgatatatggaggacagactccgtaatttggaaattaga gcatctgaggtggaaaaggcggagttgatattagaatccacgaaatccaacttagagtcaacagtgttagaggtccgtgg taaggaacacgagattcggaaattgacatcaatgtatgacgatgtttgtaaacaaagagatcaagccaatgacaagataa aagagctagaggagaggaatctggatttgaaatatcaagttcggcacgagttgatgaaaaatgaaagtatagaaaagaat ttagagacaatacctagactcaaagacgaaatttccgacagaggaaaagaaatagaaaatctcagatcagaaatggaaga caaaaacgctttactgatggcggcaaggaaagctgtccgagaatacaaagaacagaatagggaaatggaacaaaaagtat gtgagtcggatgcaatgagagatgaattggaaatgactcaaggcgaagtgttaacattgaaacagcttatacaagggaaa aattcattggttattcaaaaatctaaggccctggacgtggcgaaggatgtgataaacacaatgcagttgtcaacagatcc ccatcagatagagaaaattgtaggacttctggagagaatcggttcccaaccatccacatcgacaagcagcagtgtttgtt ccagtagcattgagtttgatacgaggccaccgacacatttcagttataactcgtacagtcgtcaaagaaattcagactct acaaatcaatatggaattgatgtcaaccgaaatccctaccacggagatagtgcaaaacgccctctatcgggaggacattt cgtagagattgcatggaaagaaaaagacaattcttacgaggaaactcgacctaaaacagctattgttcatcccgtcaaac gcagtcagtctttcaaggaaaatcatcaccagagaggacaattgaccttgttgaagaggtcagaaagtcacaaaggtcaa ggtgaaaggaaatcggacgcaacaagtcctactttcgagtatacaattggacttatagaagagtgtcaaaacaataataa tgatacctccaaacctaaaaagagtgctagtttacctgtgtcgtcaaggacgaattcggctttctcaccgaggtcaaggt cacgttcaactcagtcgctaagtgaggagtcgtgcttttcgtcgtcagaaaacacggattctgacgaaaaaacttttgaa gtggtagaaaaattatcaaatctcacatacaaggaaaaagagggaatattagaacattttatcaatgttggagacagaat attagtcacagtttcgcaaaaacctccaaaatacggcagaaaaatgcctggcaagcccaagacctacacaggaataataa aatacagaggtaacttggacaagaaagggtacgatcctagggtgttcataggtgtgagacttgatgaaaacgctggtgac acagatggggtcttaaagggaaaacgttacatgtacacaccctccgatcagggcaagttcttcaaattactggacgtcaa ctctattttagatgtcaagagtgggcggtaccgttcagtgacgtcaattctctctcaacacttcctgaaaaagatgaagt cttccaaaagatga |
Protein
Protein ID | pfu_aug1.0_5975.1_59905.t1 |
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Definition | - |
>pfu_aug1.0_5975.1_59905.t1 MLLNSVKQKERRIRFIENLSLQVKIDRLLQNQSDAGQKLFKSNELVEKLRTDNKKKVEQIEKLQRDIRYMEDRLRNLEIR ASEVEKAELILESTKSNLESTVLEVRGKEHEIRKLTSMYDDVCKQRDQANDKIKELEERNLDLKYQVRHELMKNESIEKN LETIPRLKDEISDRGKEIENLRSEMEDKNALLMAARKAVREYKEQNREMEQKVCESDAMRDELEMTQGEVLTLKQLIQGK NSLVIQKSKALDVAKDVINTMQLSTDPHQIEKIVGLLERIGSQPSTSTSSSVCSSSIEFDTRPPTHFSYNSYSRQRNSDS TNQYGIDVNRNPYHGDSAKRPLSGGHFVEIAWKEKDNSYEETRPKTAIVHPVKRSQSFKENHHQRGQLTLLKRSESHKGQ GERKSDATSPTFEYTIGLIEECQNNNNDTSKPKKSASLPVSSRTNSAFSPRSRSRSTQSLSEESCFSSSENTDSDEKTFE VVEKLSNLTYKEKEGILEHFINVGDRILVTVSQKPPKYGRKMPGKPKTYTGIIKYRGNLDKKGYDPRVFIGVRLDENAGD TDGVLKGKRYMYTPSDQGKFFKLLDVNSILDVKSGRYRSVTSILSQHFLKKMKSSKR |