Gene
| Gene Model ID | pfu_aug1.0_5975.1_59905 |
|---|---|
| Locus | scaffold5975.1 : 36746 ... 43810 : + |
| To GenomeBrowser | scaffold5975.1:36746..43810 |
| Genes list of scaffold | scaffold5975.1 |
| Synonym | pfu_aug2.0_133.1_10319 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5975.1_59905.t1 | 1 | 1 | CAP_GLY | 525 | 583 | 2.8e-09 | 36.5 | 1.0e-12 | 4.9e-09 | 35.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5975.1_59905.t1 | gi|291230694|ref|XP_002735301.1| | 2.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_5975.1_59905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5975.1_59905.t1 atgctactaaattcagttaaacaaaaagagagacgaatcagattcatcgaaaacttgagtttacaggttaagatcgacag actgctacaaaatcagagtgatgcgggacagaaactgtttaaatctaacgaactggtggaaaagttacggacagataata aaaagaaagtagaacaaatagaaaaactccagagggatatacgatatatggaggacagactccgtaatttggaaattaga gcatctgaggtggaaaaggcggagttgatattagaatccacgaaatccaacttagagtcaacagtgttagaggtccgtgg taaggaacacgagattcggaaattgacatcaatgtatgacgatgtttgtaaacaaagagatcaagccaatgacaagataa aagagctagaggagaggaatctggatttgaaatatcaagttcggcacgagttgatgaaaaatgaaagtatagaaaagaat ttagagacaatacctagactcaaagacgaaatttccgacagaggaaaagaaatagaaaatctcagatcagaaatggaaga caaaaacgctttactgatggcggcaaggaaagctgtccgagaatacaaagaacagaatagggaaatggaacaaaaagtat gtgagtcggatgcaatgagagatgaattggaaatgactcaaggcgaagtgttaacattgaaacagcttatacaagggaaa aattcattggttattcaaaaatctaaggccctggacgtggcgaaggatgtgataaacacaatgcagttgtcaacagatcc ccatcagatagagaaaattgtaggacttctggagagaatcggttcccaaccatccacatcgacaagcagcagtgtttgtt ccagtagcattgagtttgatacgaggccaccgacacatttcagttataactcgtacagtcgtcaaagaaattcagactct acaaatcaatatggaattgatgtcaaccgaaatccctaccacggagatagtgcaaaacgccctctatcgggaggacattt cgtagagattgcatggaaagaaaaagacaattcttacgaggaaactcgacctaaaacagctattgttcatcccgtcaaac gcagtcagtctttcaaggaaaatcatcaccagagaggacaattgaccttgttgaagaggtcagaaagtcacaaaggtcaa ggtgaaaggaaatcggacgcaacaagtcctactttcgagtatacaattggacttatagaagagtgtcaaaacaataataa tgatacctccaaacctaaaaagagtgctagtttacctgtgtcgtcaaggacgaattcggctttctcaccgaggtcaaggt cacgttcaactcagtcgctaagtgaggagtcgtgcttttcgtcgtcagaaaacacggattctgacgaaaaaacttttgaa gtggtagaaaaattatcaaatctcacatacaaggaaaaagagggaatattagaacattttatcaatgttggagacagaat attagtcacagtttcgcaaaaacctccaaaatacggcagaaaaatgcctggcaagcccaagacctacacaggaataataa aatacagaggtaacttggacaagaaagggtacgatcctagggtgttcataggtgtgagacttgatgaaaacgctggtgac acagatggggtcttaaagggaaaacgttacatgtacacaccctccgatcagggcaagttcttcaaattactggacgtcaa ctctattttagatgtcaagagtgggcggtaccgttcagtgacgtcaattctctctcaacacttcctgaaaaagatgaagt cttccaaaagatga |
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Protein
| Protein ID | pfu_aug1.0_5975.1_59905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5975.1_59905.t1 MLLNSVKQKERRIRFIENLSLQVKIDRLLQNQSDAGQKLFKSNELVEKLRTDNKKKVEQIEKLQRDIRYMEDRLRNLEIR ASEVEKAELILESTKSNLESTVLEVRGKEHEIRKLTSMYDDVCKQRDQANDKIKELEERNLDLKYQVRHELMKNESIEKN LETIPRLKDEISDRGKEIENLRSEMEDKNALLMAARKAVREYKEQNREMEQKVCESDAMRDELEMTQGEVLTLKQLIQGK NSLVIQKSKALDVAKDVINTMQLSTDPHQIEKIVGLLERIGSQPSTSTSSSVCSSSIEFDTRPPTHFSYNSYSRQRNSDS TNQYGIDVNRNPYHGDSAKRPLSGGHFVEIAWKEKDNSYEETRPKTAIVHPVKRSQSFKENHHQRGQLTLLKRSESHKGQ GERKSDATSPTFEYTIGLIEECQNNNNDTSKPKKSASLPVSSRTNSAFSPRSRSRSTQSLSEESCFSSSENTDSDEKTFE VVEKLSNLTYKEKEGILEHFINVGDRILVTVSQKPPKYGRKMPGKPKTYTGIIKYRGNLDKKGYDPRVFIGVRLDENAGD TDGVLKGKRYMYTPSDQGKFFKLLDVNSILDVKSGRYRSVTSILSQHFLKKMKSSKR |
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