Gene
| Gene Model ID | pfu_aug1.0_5975.1_59909 |
|---|---|
| Locus | scaffold5975.1 : 81247 ... 87965 : - |
| To GenomeBrowser | scaffold5975.1:81247..87965 |
| Genes list of scaffold | scaffold5975.1 |
| Synonym | pfu_aug2.0_133.1_10321 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5975.1_59909.t1 | 1 | 1 | SK_channel | 47 | 162 | 6.7e-22 | 77.5 | 2.3e-25 | 6.7e-22 | 77.5 |
| pfu_aug1.0_5975.1_59909.t1 | 2 | 1 | Ion_trans_2 | 105 | 135 | 2.6e-15 | 55.8 | 0.28 | 840.0 | -0.3 |
| pfu_aug1.0_5975.1_59909.t1 | 2 | 2 | Ion_trans_2 | 250 | 330 | 2.6e-15 | 55.8 | 8.7e-19 | 2.6e-15 | 55.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5975.1_59909.t1 | gi|194763811|ref|XP_001964026.1| | GF21340 [Drosophila ananassae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5975.1_59909.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5975.1_59909.t1 atggagggtcctggaatcccattggttaaaactgagaatcattacacgcgttacgttagtacggacaatctcattggtag atcaacaagtatggaatccaacacaaaagcagacgaagagaaaacgcatctgggatttcgtctgcgaattcgaaaagagc tcatagggaggcgtactcgtgttgtggacgcttcattccttctcagtctgatcggtattattgctaacgtattcgacaca gaactgaagttttcaggatcgattggagcaaatagctctgtgtccgtagtcctccgtatcattacttccattaccaccgt tttactagtcatgtctgtgattttatacaatctcataggaataaaactacaattgatcacggctggactcgaaaattggt ctttggtgatcaattatagtataatattcaaaacggtaacggaggttatagtctgctcgttccatccgttaccgtacgga gatgttcgtatccctgtgatggtcgtacataaagacgacgaaggcaacccggagtatttgtcacagtatattccagcaaa ttcaatattgtcagtattaatgttttgtaggctgtatatactagggcgattcttggttgttcatagcgatttgttcaggg atacaactgttcaaagtttgggaacacttagtaaggttcgaattaatgctcaatttgtctttaaagcattgatgacgaca cgtccgggcacctgtctgacggccatcttgttgtccactcttataattagtagctggtcgatacgggtatgtgaattcta cacagagccagctgacggtaacggaaattacttacaagcactatggttaacatccgtaacatttctgacattaggttacg gagatgtcgtaccacacagtatttgtggtagaatcattgctataaaaactggacttatgggcgtgggaattatggcgtta tgtgtagcagttctcgcgcgaaaactcgagcagacgagatctgagcgatatgtgcatacctttgttcagcaaatacacat ggacaaactgcatcgtcatgcagcagctgatgtagtcaaacagtcaatgatagtatggaaattgcgtagatcaggctatt cctttcatagtagccggatattgcgtcataggcggaagttgttggacgccattagacgaatgaaccaatcacaattctcg aaatctcagcttcgagactgtgtgattggaacagtagaagtcgcgaagggcgtagctgaaattaatgatgttgcgtatga aataaaggaagatcaagctaacattcaacaaagattggaaaatcttgaaaaacttatgacaaatattcacttccagttgt acgaaatgagagagagcatgagggaaaaagaaaaatctgcaaaccttaaaaagaattga |
|
Protein
| Protein ID | pfu_aug1.0_5975.1_59909.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5975.1_59909.t1 MEGPGIPLVKTENHYTRYVSTDNLIGRSTSMESNTKADEEKTHLGFRLRIRKELIGRRTRVVDASFLLSLIGIIANVFDT ELKFSGSIGANSSVSVVLRIITSITTVLLVMSVILYNLIGIKLQLITAGLENWSLVINYSIIFKTVTEVIVCSFHPLPYG DVRIPVMVVHKDDEGNPEYLSQYIPANSILSVLMFCRLYILGRFLVVHSDLFRDTTVQSLGTLSKVRINAQFVFKALMTT RPGTCLTAILLSTLIISSWSIRVCEFYTEPADGNGNYLQALWLTSVTFLTLGYGDVVPHSICGRIIAIKTGLMGVGIMAL CVAVLARKLEQTRSERYVHTFVQQIHMDKLHRHAAADVVKQSMIVWKLRRSGYSFHSSRILRHRRKLLDAIRRMNQSQFS KSQLRDCVIGTVEVAKGVAEINDVAYEIKEDQANIQQRLENLEKLMTNIHFQLYEMRESMREKEKSANLKKN |
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