Gene
Gene Model ID | pfu_aug1.0_5975.1_59909 |
---|---|
Locus | scaffold5975.1 : 81247 ... 87965 : - |
To GenomeBrowser | scaffold5975.1:81247..87965 |
Genes list of scaffold | scaffold5975.1 |
Synonym | pfu_aug2.0_133.1_10321 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5975.1_59909.t1 | 1 | 1 | SK_channel | 47 | 162 | 6.7e-22 | 77.5 | 2.3e-25 | 6.7e-22 | 77.5 |
pfu_aug1.0_5975.1_59909.t1 | 2 | 1 | Ion_trans_2 | 105 | 135 | 2.6e-15 | 55.8 | 0.28 | 840.0 | -0.3 |
pfu_aug1.0_5975.1_59909.t1 | 2 | 2 | Ion_trans_2 | 250 | 330 | 2.6e-15 | 55.8 | 8.7e-19 | 2.6e-15 | 55.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5975.1_59909.t1 | gi|194763811|ref|XP_001964026.1| | GF21340 [Drosophila ananassae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_5975.1_59909.t1 |
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Definition | - |
>pfu_aug1.0_5975.1_59909.t1 atggagggtcctggaatcccattggttaaaactgagaatcattacacgcgttacgttagtacggacaatctcattggtag atcaacaagtatggaatccaacacaaaagcagacgaagagaaaacgcatctgggatttcgtctgcgaattcgaaaagagc tcatagggaggcgtactcgtgttgtggacgcttcattccttctcagtctgatcggtattattgctaacgtattcgacaca gaactgaagttttcaggatcgattggagcaaatagctctgtgtccgtagtcctccgtatcattacttccattaccaccgt tttactagtcatgtctgtgattttatacaatctcataggaataaaactacaattgatcacggctggactcgaaaattggt ctttggtgatcaattatagtataatattcaaaacggtaacggaggttatagtctgctcgttccatccgttaccgtacgga gatgttcgtatccctgtgatggtcgtacataaagacgacgaaggcaacccggagtatttgtcacagtatattccagcaaa ttcaatattgtcagtattaatgttttgtaggctgtatatactagggcgattcttggttgttcatagcgatttgttcaggg atacaactgttcaaagtttgggaacacttagtaaggttcgaattaatgctcaatttgtctttaaagcattgatgacgaca cgtccgggcacctgtctgacggccatcttgttgtccactcttataattagtagctggtcgatacgggtatgtgaattcta cacagagccagctgacggtaacggaaattacttacaagcactatggttaacatccgtaacatttctgacattaggttacg gagatgtcgtaccacacagtatttgtggtagaatcattgctataaaaactggacttatgggcgtgggaattatggcgtta tgtgtagcagttctcgcgcgaaaactcgagcagacgagatctgagcgatatgtgcatacctttgttcagcaaatacacat ggacaaactgcatcgtcatgcagcagctgatgtagtcaaacagtcaatgatagtatggaaattgcgtagatcaggctatt cctttcatagtagccggatattgcgtcataggcggaagttgttggacgccattagacgaatgaaccaatcacaattctcg aaatctcagcttcgagactgtgtgattggaacagtagaagtcgcgaagggcgtagctgaaattaatgatgttgcgtatga aataaaggaagatcaagctaacattcaacaaagattggaaaatcttgaaaaacttatgacaaatattcacttccagttgt acgaaatgagagagagcatgagggaaaaagaaaaatctgcaaaccttaaaaagaattga |
Protein
Protein ID | pfu_aug1.0_5975.1_59909.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5975.1_59909.t1 MEGPGIPLVKTENHYTRYVSTDNLIGRSTSMESNTKADEEKTHLGFRLRIRKELIGRRTRVVDASFLLSLIGIIANVFDT ELKFSGSIGANSSVSVVLRIITSITTVLLVMSVILYNLIGIKLQLITAGLENWSLVINYSIIFKTVTEVIVCSFHPLPYG DVRIPVMVVHKDDEGNPEYLSQYIPANSILSVLMFCRLYILGRFLVVHSDLFRDTTVQSLGTLSKVRINAQFVFKALMTT RPGTCLTAILLSTLIISSWSIRVCEFYTEPADGNGNYLQALWLTSVTFLTLGYGDVVPHSICGRIIAIKTGLMGVGIMAL CVAVLARKLEQTRSERYVHTFVQQIHMDKLHRHAAADVVKQSMIVWKLRRSGYSFHSSRILRHRRKLLDAIRRMNQSQFS KSQLRDCVIGTVEVAKGVAEINDVAYEIKEDQANIQQRLENLEKLMTNIHFQLYEMRESMREKEKSANLKKN |