Gene
| Gene Model ID | pfu_aug1.0_59807.1_70898 |
|---|---|
| Locus | scaffold59807.1 : 1 ... 3830 : + |
| To GenomeBrowser | scaffold59807.1:1..3830 |
| Genes list of scaffold | scaffold59807.1 |
| Synonym | pfu_aug2.0_648.1_27629 |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | troponin-T |
| Description | Troponin-T partial sequence. BLASTP top hit to AB004637 (Mizuhopecten yessoensis). |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_59807.1_70898.t1 | gi|2541910|dbj|BAA22850.1| | troponin T [Mizuhopecten yessoensis] | 5.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 3 |
Transcript
| Transcript ID | pfu_aug1.0_59807.1_70898.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_59807.1_70898.t1 gatgctaaaaagcgaaaggaagaacgagtagcacaagaaatagcagaatttgaagaacagagaaaagaggagcgagagaa agaacaagctgaaattcaggctcttagagaaaagagggagcaaagaaaacgcgagagagcggaggaggaacaaagaatgg cagagagcagagcccaggaggaggcaaggagaaaagccgaggaggaagaacgaaagaggaagaaggctgaagaagaaagg aagagaaaagaagaaagggagagaaaacgccgtgaacaagaagaaatgataaaaaacatgcgaaaaccaaactttgttat ctcaaaacgcgaaggagatcccaaaggtggagggttaataccgggggtaattgatgtatatcccacacaattacacgatt tcaatttatttttttctagattcgacagactggcagataaattcgctggtgccccaccaaaaattcagttatgcagtaaa tacgaaagacatacagatcaccggtcatatgatcaaagaaaagatttatacgaagaattaagtaaacctatagaaccgcc aaaaatagggcgtcgacaagacgaggagggtgaagcagccgaagccgaagagggaggggaagaatag |
|
Protein
| Protein ID | pfu_aug1.0_59807.1_70898.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_59807.1_70898.t1 DAKKRKEERVAQEIAEFEEQRKEEREKEQAEIQALREKREQRKRERAEEEQRMAESRAQEEARRKAEEEERKRKKAEEER KRKEERERKRREQEEMIKNMRKPNFVISKREGDPKGGGLIPGVIDVYPTQLHDFNLFFSRFDRLADKFAGAPPKIQLCSK YERHTDHRSYDQRKDLYEELSKPIEPPKIGRRQDEEGEAAEAEEGGEE |
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