Gene
Gene Model ID | pfu_aug1.0_59807.1_70898 |
---|---|
Locus | scaffold59807.1 : 1 ... 3830 : + |
To GenomeBrowser | scaffold59807.1:1..3830 |
Genes list of scaffold | scaffold59807.1 |
Synonym | pfu_aug2.0_648.1_27629 |
Manual annotation
Study field | structural proteins |
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Gene name | troponin-T |
Description | Troponin-T partial sequence. BLASTP top hit to AB004637 (Mizuhopecten yessoensis). |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_59807.1_70898.t1 | gi|2541910|dbj|BAA22850.1| | troponin T [Mizuhopecten yessoensis] | 5.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 3 |
Transcript
Transcript ID | pfu_aug1.0_59807.1_70898.t1 |
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Definition | - |
>pfu_aug1.0_59807.1_70898.t1 gatgctaaaaagcgaaaggaagaacgagtagcacaagaaatagcagaatttgaagaacagagaaaagaggagcgagagaa agaacaagctgaaattcaggctcttagagaaaagagggagcaaagaaaacgcgagagagcggaggaggaacaaagaatgg cagagagcagagcccaggaggaggcaaggagaaaagccgaggaggaagaacgaaagaggaagaaggctgaagaagaaagg aagagaaaagaagaaagggagagaaaacgccgtgaacaagaagaaatgataaaaaacatgcgaaaaccaaactttgttat ctcaaaacgcgaaggagatcccaaaggtggagggttaataccgggggtaattgatgtatatcccacacaattacacgatt tcaatttatttttttctagattcgacagactggcagataaattcgctggtgccccaccaaaaattcagttatgcagtaaa tacgaaagacatacagatcaccggtcatatgatcaaagaaaagatttatacgaagaattaagtaaacctatagaaccgcc aaaaatagggcgtcgacaagacgaggagggtgaagcagccgaagccgaagagggaggggaagaatag |
Protein
Protein ID | pfu_aug1.0_59807.1_70898.t1 |
---|---|
Definition | - |
>pfu_aug1.0_59807.1_70898.t1 DAKKRKEERVAQEIAEFEEQRKEEREKEQAEIQALREKREQRKRERAEEEQRMAESRAQEEARRKAEEEERKRKKAEEER KRKEERERKRREQEEMIKNMRKPNFVISKREGDPKGGGLIPGVIDVYPTQLHDFNLFFSRFDRLADKFAGAPPKIQLCSK YERHTDHRSYDQRKDLYEELSKPIEPPKIGRRQDEEGEAAEAEEGGEE |