Gene
| Gene Model ID | pfu_aug1.0_5987.1_23926 |
|---|---|
| Locus | scaffold5987.1 : 15686 ... 29650 : + |
| To GenomeBrowser | scaffold5987.1:15686..29650 |
| Genes list of scaffold | scaffold5987.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5987.1_23926.t1 | 2 | 1 | IncA | 10 | 112 | 9.4e-06 | 25.3 | 1.9e-06 | 0.0022 | 17.6 |
| pfu_aug1.0_5987.1_23926.t1 | 2 | 2 | IncA | 218 | 274 | 9.4e-06 | 25.3 | 3.5e-05 | 0.04 | 13.5 |
| pfu_aug1.0_5987.1_23926.t1 | 1 | 1 | C1q | 384 | 464 | 2.8e-10 | 40.2 | 8.4e-13 | 9.6e-10 | 38.5 |
Transcript
| Transcript ID | pfu_aug1.0_5987.1_23926.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5987.1_23926.t1 atgaatctattcaagttacacatttttcttctgtgtatcttttcttcatcggcatctgaaagcgtctcaaaagctgaata cgatcaagaaataaagaaaatctacgagaagttggagaaacttgatcagttacagaatgaattggacgaaacgagaaaag aaaataaaattttgaaagaaaatgttcagattttacaaaaggagaataaagggtttcaagaaacgatagtgtctcttgaa tacagatatcgtaaccttgaacttaacgtgaatgagttgagaaaggagagaaatgagaaacaaaataaagcaacactaca cagcgctaggaattcagaacttgaaaatacgtccgatgattcaaattcccgtggattgtttggttatactcagcagcagg gaaatataacagattttgtatcaaaaacgaaagtggattccatagtcaacaaaaatgagagcagatcactcaataaagac ggttttctaacattgggtgtcctcgtcattgataccctcgtgtttgaacccaataatatacgaatatattgctatgaaaa tattatattgaaacctttgttctatcgttgtaatttagatcgtacatctgaaatcgtctcaaaaactgaatatgatcatg aaatcaggaaaatctacgagaagttggaaatacttgatgagctgtggaaagaaaataaagttttgaaagaaaatattcag agtttgcaaaaggagaatgtggagtttcaagacgccatcgtgtcgcttgaatctgacgtggacaagttaaaaaaggagat actggaactgaattctaaaggaacagtacataacagtttgaattcaaaaagcgaagaaaaaccaaatgctgattttttaa tgctacagagcagagaagtatgtcagaattattatataaagggaagtcagattatgaagacaatgcacacacgaacagtt cattggagaaagggatatggtcattatccatatttgtcattatatcgcagttcgtcgagggatagtgacgtcttttcaaa acagcatcgggttccttgcttacaacccaaaacatcaacaaaacctcggtatccatcagacagtggagttccctattgca ttaacaaatatccttcaagtagcatctccagagctcctgccgacggtctttactatttctccgtcactatattgagtttt caaggggaggacatagaggtggagatcgtgcataatggtaacggtatggtgtacacatactctggtggggagacaatgta cggatcgggatcaacagcagctgtccttcaactccatgccaacgacgatgtgtggataaggattttaaacgtaagaattg taaatgatggtaacgtcagagtctttgaaggcaaatggtcatccttttgtggattcaaaatcgcctaa |
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Protein
| Protein ID | pfu_aug1.0_5987.1_23926.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5987.1_23926.t1 MNLFKLHIFLLCIFSSSASESVSKAEYDQEIKKIYEKLEKLDQLQNELDETRKENKILKENVQILQKENKGFQETIVSLE YRYRNLELNVNELRKERNEKQNKATLHSARNSELENTSDDSNSRGLFGYTQQQGNITDFVSKTKVDSIVNKNESRSLNKD GFLTLGVLVIDTLVFEPNNIRIYCYENIILKPLFYRCNLDRTSEIVSKTEYDHEIRKIYEKLEILDELWKENKVLKENIQ SLQKENVEFQDAIVSLESDVDKLKKEILELNSKGTVHNSLNSKSEEKPNADFLMLQSREVCQNYYIKGSQIMKTMHTRTV HWRKGYGHYPYLSLYRSSSRDSDVFSKQHRVPCLQPKTSTKPRYPSDSGVPYCINKYPSSSISRAPADGLYYFSVTILSF QGEDIEVEIVHNGNGMVYTYSGGETMYGSGSTAAVLQLHANDDVWIRILNVRIVNDGNVRVFEGKWSSFCGFKIA |
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