Gene
| Gene Model ID | pfu_aug1.0_59961.1_70900 |
|---|---|
| Locus | scaffold59961.1 : 1 ... 924 : + |
| To GenomeBrowser | scaffold59961.1:1..924 |
| Genes list of scaffold | scaffold59961.1 |
| Synonym | pfu_aug2.0_528.1_27508 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_59961.1_70900.t1 | 7 | 1 | Ank_5 | 2 | 38 | 1.1e-38 | 130.3 | 1.3e-10 | 4.0e-07 | 30.0 |
| pfu_aug1.0_59961.1_70900.t1 | 6 | 1 | Ank_4 | 2 | 31 | 1.4e-30 | 105.0 | 2.2e-06 | 0.0065 | 16.9 |
| pfu_aug1.0_59961.1_70900.t1 | 4 | 1 | Ank_2 | 7 | 69 | 5.46506e-44 | 148.4 | 1.4e-13 | 4.1e-10 | 39.8 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 1 | Ank | 10 | 37 | 1.12104e-44 | 148.1 | 3.4e-10 | 1.0e-06 | 28.2 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 1 | Ank_3 | 10 | 36 | 4.3e-38 | 125.5 | 1.1e-08 | 3.3e-05 | 23.6 |
| pfu_aug1.0_59961.1_70900.t1 | 6 | 2 | Ank_4 | 44 | 66 | 1.4e-30 | 105.0 | 0.00071 | 2.1 | 8.9 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 2 | Ank_5 | 45 | 66 | 1.1e-38 | 130.3 | 0.00031 | 0.93 | 9.8 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 2 | Ank | 46 | 69 | 1.12104e-44 | 148.1 | 1.4e-05 | 0.041 | 13.7 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 2 | Ank_3 | 46 | 73 | 4.3e-38 | 125.5 | 3.8e-05 | 0.11 | 12.7 |
| pfu_aug1.0_59961.1_70900.t1 | 6 | 3 | Ank_4 | 47 | 102 | 1.4e-30 | 105.0 | 1.8e-06 | 0.0054 | 17.2 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 3 | Ank_5 | 82 | 121 | 1.1e-38 | 130.3 | 1.1e-06 | 0.0034 | 17.5 |
| pfu_aug1.0_59961.1_70900.t1 | 4 | 2 | Ank_2 | 84 | 146 | 5.46506e-44 | 148.4 | 3.5e-12 | 1.1e-08 | 35.3 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 3 | Ank_3 | 84 | 109 | 4.3e-38 | 125.5 | 0.0014 | 4.2 | 7.9 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 3 | Ank | 85 | 113 | 1.12104e-44 | 148.1 | 0.00011 | 0.32 | 10.8 |
| pfu_aug1.0_59961.1_70900.t1 | 6 | 4 | Ank_4 | 85 | 136 | 1.4e-30 | 105.0 | 4.8e-08 | 0.00014 | 22.2 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 4 | Ank | 115 | 146 | 1.12104e-44 | 148.1 | 2.1e-07 | 0.00062 | 19.4 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 4 | Ank_3 | 115 | 143 | 4.3e-38 | 125.5 | 5.8e-07 | 0.0017 | 18.3 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 4 | Ank_5 | 116 | 156 | 1.1e-38 | 130.3 | 3.5e-07 | 0.001 | 19.2 |
| pfu_aug1.0_59961.1_70900.t1 | 4 | 3 | Ank_2 | 121 | 211 | 5.46506e-44 | 148.4 | 5.1e-23 | 1.5e-19 | 70.1 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 5 | Ank_5 | 135 | 186 | 1.1e-38 | 130.3 | 2.1e-09 | 6.1e-06 | 26.3 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 5 | Ank | 149 | 175 | 1.12104e-44 | 148.1 | 7.7e-07 | 0.0023 | 17.6 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 5 | Ank_3 | 149 | 176 | 4.3e-38 | 125.5 | 6.8e-08 | 0.0002 | 21.2 |
| pfu_aug1.0_59961.1_70900.t1 | 6 | 5 | Ank_4 | 149 | 190 | 1.4e-30 | 105.0 | 7.8e-09 | 2.3e-05 | 24.7 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 6 | Ank_5 | 168 | 214 | 1.1e-38 | 130.3 | 4.2e-11 | 1.2e-07 | 31.6 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 6 | Ank | 182 | 213 | 1.12104e-44 | 148.1 | 1.2e-11 | 3.5e-08 | 32.8 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 6 | Ank_3 | 182 | 210 | 4.3e-38 | 125.5 | 8.9e-07 | 0.0026 | 17.8 |
| pfu_aug1.0_59961.1_70900.t1 | 6 | 6 | Ank_4 | 195 | 237 | 1.4e-30 | 105.0 | 2.5e-08 | 7.3e-05 | 23.1 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 7 | Ank | 218 | 242 | 1.12104e-44 | 148.1 | 1.5e-07 | 0.00046 | 19.8 |
| pfu_aug1.0_59961.1_70900.t1 | 4 | 4 | Ank_2 | 218 | 257 | 5.46506e-44 | 148.4 | 7.9e-08 | 0.00024 | 21.4 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 7 | Ank_5 | 218 | 255 | 1.1e-38 | 130.3 | 3.3e-08 | 9.8e-05 | 22.4 |
| pfu_aug1.0_59961.1_70900.t1 | 7 | 7 | Ank_3 | 218 | 242 | 4.3e-38 | 125.5 | 7.8e-06 | 0.023 | 14.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_59961.1_70900.t1 | gi|340386920|ref|XP_003391956.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 10-like [Amphimedon queenslandica] | 5.0e-31 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_59961.1_70900.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_59961.1_70900.t1 aggagcgctcattaattcttctgacatagacggttttcaacctcttcatattgctatgcggtatggacatgctaatatgg tcatatacctcatcaagagaggggcacatacgtatgcggctaggacaattgacaagggtttcacacctttgcacgtaggg gtacattatcagaagttggaagcgatgaaagcgcttttagaaactgggaaaatgactgtaaatgttaaaacccccttgaa acaaggttggcaaactagtctgcatttagctgcaaaatcttcattttatgaaggattcgcgctgttatgtcagtgggatg ctgatctttctgcagtagatgctaatggtctaagaccaatacattcagcagcctcatccgacgaccctaggattcttgaa ttcctcctcaaaaagggagtcgatgttgaagctgaagatcacactggaaggaggcctattcattgtgcagtttactctaa acgagttcaaaatgtcaagcttttaattcagcatggtgtgaacgtccgaacttttgagaattcagggttgttacccctgc acggtgcagtcctttgtcgttctaatgaaattgtgaagctacttctcaatgctggtgctgatccaaacgccaggacgaaa tcccctcgtgaagaaacacctttattgattgctgcatcgcttggacattcttctattgcggagactttacttcaggctgg aggcgacgcaaaattacgcagtgcaaacaacacaactacgttacacaaatgtcaaaagatgacaagtaaagtcactcatc cttctttttacctcatcttgattaattactcctttcccgtatggtgtatctctaatcttctctggcatatctag |
|
Protein
| Protein ID | pfu_aug1.0_59961.1_70900.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_59961.1_70900.t1 GALINSSDIDGFQPLHIAMRYGHANMVIYLIKRGAHTYAARTIDKGFTPLHVGVHYQKLEAMKALLETGKMTVNVKTPLK QGWQTSLHLAAKSSFYEGFALLCQWDADLSAVDANGLRPIHSAASSDDPRILEFLLKKGVDVEAEDHTGRRPIHCAVYSK RVQNVKLLIQHGVNVRTFENSGLLPLHGAVLCRSNEIVKLLLNAGADPNARTKSPREETPLLIAASLGHSSIAETLLQAG GDAKLRSANNTTTLHKCQKMTSKVTHPSFYLILINYSFPVWCISNLLWHI |
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