Gene
| Gene Model ID | pfu_aug1.0_5997.1_31105 |
|---|---|
| Locus | scaffold5997.1 : 25956 ... 33154 : + |
| To GenomeBrowser | scaffold5997.1:25956..33154 |
| Genes list of scaffold | scaffold5997.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5997.1_31105.t1 | 1 | 1 | UQ_con | 1 | 88 | 5.5e-26 | 90.6 | 4.1e-30 | 6.1e-26 | 90.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5997.1_31105.t1 | gi|317574775|ref|NP_001187664.1| | ubiquitin-conjugating enzyme e2 g2 [Ictalurus punctatus] | 5.00264e-43 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 5 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5997.1_31105.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5997.1_31105.t1 atgaaatttacttgtgatatttttcatcccaatatttaccctgatgggagagtatgtatatctatcttacacgcccctgg agatgaccccatgggatatgaaaccagtgcagaaaggtggagccctgtacaaagtgtagagaaaatccttttatctgttg tcagcatgctagcagagccaaacgatgagagtgcagcaaatgtagacgcagcaaaaacgtggcgagaaaataggaagaaa tttgaagaaattgcacataggacggtcagaaaatcacttggcgtatga |
|
Protein
| Protein ID | pfu_aug1.0_5997.1_31105.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5997.1_31105.t1 MKFTCDIFHPNIYPDGRVCISILHAPGDDPMGYETSAERWSPVQSVEKILLSVVSMLAEPNDESAANVDAAKTWRENRKK FEEIAHRTVRKSLGV |
|