Gene
| Gene Model ID | pfu_aug1.0_5997.1_31106 |
|---|---|
| Locus | scaffold5997.1 : 40506 ... 56063 : + |
| To GenomeBrowser | scaffold5997.1:40506..56063 |
| Genes list of scaffold | scaffold5997.1 |
| Synonym | pfu_aug2.0_432.1_07516 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5997.1_31106.t1 | 1 | 1 | Aldo_ket_red | 24 | 263 | 0.0 | 180.8 | 0.0 | 0.0 | 180.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5997.1_31106.t1 | gi|156372639|ref|XP_001629144.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_5997.1_31106.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5997.1_31106.t1 atgacgttaaaagctacgagcctggccagcaaaatcgtactgaacgatggagtagagatgccgatgtttggacttgggtt gtatatgtcggcatccgggcagggtaaagctgcggaaaaagcagtaactcatgcgttgcagaataactataggctcctag acacagctcagttctatggaaatgaagctgacgttgggagggcagtgaagaaatctggagttgacaggaaagatttattc gttgtcaccaaagtatgggaaaatggtgaagcgcgatgtaaagaggtcttcaacgaaagtatgaaaaagctcgatcttgg atacattgacctgtatctgatacattccccatctgcaggaaagaacgtggagacgtataaaacactattggactttaaaa gtaaaggcttaatcaggtcagtgggtgtgtcaaattatggaatacaacacttagaggggttgaaggatgccggcctgccc accccctcagtcaaccaaattgagctacacccttggcagcagaagaagcacatcgtaaaatactgcagagagaacggaat cgctgtgatgggttactcccccatggccaagggacaaaaacttaaagatccaacactcgggaaaattgctcaaaaatata acaaaaccccggcccaggttatgatccgctggagcgtccagatgggatttatcaccataccaaaatcagtcaacttagat cggatcattgagaatgcggatgtttttgattggtcgattgatgaagaggacatgaccacactagatggtatgccagacga ttcttgcacgtggaatccttgtgaatcgccatggaaaggatga |
|
Protein
| Protein ID | pfu_aug1.0_5997.1_31106.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5997.1_31106.t1 MTLKATSLASKIVLNDGVEMPMFGLGLYMSASGQGKAAEKAVTHALQNNYRLLDTAQFYGNEADVGRAVKKSGVDRKDLF VVTKVWENGEARCKEVFNESMKKLDLGYIDLYLIHSPSAGKNVETYKTLLDFKSKGLIRSVGVSNYGIQHLEGLKDAGLP TPSVNQIELHPWQQKKHIVKYCRENGIAVMGYSPMAKGQKLKDPTLGKIAQKYNKTPAQVMIRWSVQMGFITIPKSVNLD RIIENADVFDWSIDEEDMTTLDGMPDDSCTWNPCESPWKG |
|