Gene
Gene Model ID | pfu_aug1.0_6.1_57879 |
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Locus | scaffold6.1 : 22436 ... 36535 : - |
To GenomeBrowser | scaffold6.1:22436..36535 |
Genes list of scaffold | scaffold6.1 |
Synonym | pfu_aug2.0_486.1_20832 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_6.1_57879.t1 | 2 | 1 | Neur_chan_LBD | 26 | 76 | 1.6e-36 | 125.5 | 5.4e-06 | 0.04 | 13.0 |
pfu_aug1.0_6.1_57879.t1 | 2 | 2 | Neur_chan_LBD | 132 | 275 | 1.6e-36 | 125.5 | 9.9e-36 | 7.3e-32 | 110.2 |
pfu_aug1.0_6.1_57879.t1 | 1 | 1 | Neur_chan_memb | 282 | 499 | 4.3e-27 | 95.5 | 1.2e-30 | 9.0e-27 | 94.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_6.1_57879.t1 | gi|321465213|gb|EFX76216.1| | hypothetical protein DAPPUDRAFT_55424, partial [Daphnia pulex] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_6.1_57879.t1 |
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Definition | - |
>pfu_aug1.0_6.1_57879.t1 atgaggtcggcactcattcatttatcagttttagctgtatttttcctaagaacagatgctgagttcttggacacattcgt gacggcactgtttgcagattacgagaaggatatccgaccttactgtatggacaacggaacatcgatccccactaacgtcc acatggatttgtccttaagacagataattgatttggtgaatacatttccatatctttctttgcatttaatgatcagtgac attctgggttgcgatcgaatggctatcatcatcatcatcatcatcaaacaagacatgtacattaatatgcacatcgagac aataaccgaattggacaagttttcatggagctgttacgacgggtcctacatacagataggagacttcggaatactggtct ggaacgacacaggaagcttcgccgttgatacaattatggtacctgaaacaagggtctggattccagatctgacactctat gacaacagtgctgcatctacccttcctggtcttaaagactatgtagcaacggtaaaagacaatggtgatgtaaagtacaa ttttccatctgttataaacagcatgtgtgccatagacgtacgttacttcccctttgattatcagagttgttctttagagt ttggatcttgggcgtctccagggagtggtatcaacatatctgctctcaaaacatcggttgatatggacaattacatagaa aacattgagtggtccgttatcagcactaaagctatcagaaaagaaaaacagtatgaagagacctacccgtcaattatctt cactctatcactcagacggaagcctttattctacatgatgaatatgattttcccgtgtttgctgattacttttgttgccg tgttcggttttatgctaccgccagactctggagagaaagtaaatttggaggtcacagtcttgttgtcgctggccgttttt cagctgattgtcttggacttgatacctgcatccggggattctacccctttcataggtatttatttcatgacttccatggt actagtaggcatgtcctgcctgatgacagtgatagtattacagatccacttccgaggctgcaatagccgccaaatatcac cctggatatacaagcggattatgataccattggcaaaaataacctttgtgcaattacaaccagatacattgttagacaga caacagagtctcataacaaggaaaatgtccatccgtccaaacaaaatctacatgaatggtacgtcatcagatacgtttgt agaacactctgagagacatcctttccttcccgatatgaaagaaataatttcattggtcaacaaaataacagcaaacgtgg acgccattacacaagttgtatgtgactcggacgaaggtgacgtcataaagttgcaatggagtattctcgccaccattttt gacagattatttcttgcagtttatatcactgtctcagtaattacaacactgtccatattattacaatttcaaggagctca gtga |
Protein
Protein ID | pfu_aug1.0_6.1_57879.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6.1_57879.t1 MRSALIHLSVLAVFFLRTDAEFLDTFVTALFADYEKDIRPYCMDNGTSIPTNVHMDLSLRQIIDLVNTFPYLSLHLMISD ILGCDRMAIIIIIIIKQDMYINMHIETITELDKFSWSCYDGSYIQIGDFGILVWNDTGSFAVDTIMVPETRVWIPDLTLY DNSAASTLPGLKDYVATVKDNGDVKYNFPSVINSMCAIDVRYFPFDYQSCSLEFGSWASPGSGINISALKTSVDMDNYIE NIEWSVISTKAIRKEKQYEETYPSIIFTLSLRRKPLFYMMNMIFPCLLITFVAVFGFMLPPDSGEKVNLEVTVLLSLAVF QLIVLDLIPASGDSTPFIGIYFMTSMVLVGMSCLMTVIVLQIHFRGCNSRQISPWIYKRIMIPLAKITFVQLQPDTLLDR QQSLITRKMSIRPNKIYMNGTSSDTFVEHSERHPFLPDMKEIISLVNKITANVDAITQVVCDSDEGDVIKLQWSILATIF DRLFLAVYITVSVITTLSILLQFQGAQ |