Gene
| Gene Model ID | pfu_aug1.0_6.1_57883 |
|---|---|
| Locus | scaffold6.1 : 102168 ... 108915 : - |
| To GenomeBrowser | scaffold6.1:102168..108915 |
| Genes list of scaffold | scaffold6.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6.1_57883.t1 | 2 | 1 | KxDL | 28 | 112 | 1.8e-25 | 88.6 | 2.5e-29 | 1.8e-25 | 88.6 |
| pfu_aug1.0_6.1_57883.t1 | 2 | 2 | KxDL | 149 | 165 | 1.8e-25 | 88.6 | 0.54 | 4000.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6.1_57883.t1 | gi|241596084|ref|XP_002404521.1| | conserved hypothetical protein [Ixodes scapularis] | 6.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6.1_57883.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6.1_57883.t1 atgtctacgaccacggaagaaaatgatgacataatggaagctgaggctgcgtctagaaattctgagatatttacagaagc gttggttgatcaagtgaacaaagatgatgttagttctatggtggaaattcagactgacatgctctcaagatatgaaaaga caaatgaaatgctcatcaatttcaacatgctttcactggcaagatatgaggctaccagtaaggagttcaaacagcacaca caagtactgtacgacatgaaaaaagacttggataacgtattcagacgaatcagattacttaaacagagattgggatccat gtacccagaagcttttgcagcttgcagtgatgtgtacaatatactagatgaggaggaagaagacaaggataatgaagggg aactgaaggaaagcgacaaatcaagcacaaaagaaaataattctgaattagaaaactcacgtgtacacaacctgaattca gaagtggcatccagtttagctaaagtgacttccccagaaatatcagtaaatgtagagatacacgtagactcagataactg tgataatgtcaaacatgtagaatgtgatcaacttgacatggacaaagacgatcatttacaaaactcagatatccatgata atagtcaaagtacaaacttggcaggcaatgggcaaagtgaacaataa |
|
Protein
| Protein ID | pfu_aug1.0_6.1_57883.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6.1_57883.t1 MSTTTEENDDIMEAEAASRNSEIFTEALVDQVNKDDVSSMVEIQTDMLSRYEKTNEMLINFNMLSLARYEATSKEFKQHT QVLYDMKKDLDNVFRRIRLLKQRLGSMYPEAFAACSDVYNILDEEEEDKDNEGELKESDKSSTKENNSELENSRVHNLNS EVASSLAKVTSPEISVNVEIHVDSDNCDNVKHVECDQLDMDKDDHLQNSDIHDNSQSTNLAGNGQSEQ |
|