Gene
| Gene Model ID | pfu_aug1.0_6.1_57886 |
|---|---|
| Locus | scaffold6.1 : 128802 ... 138615 : - |
| To GenomeBrowser | scaffold6.1:128802..138615 |
| Genes list of scaffold | scaffold6.1 |
| Synonym | pfu_aug2.0_486.1_20827 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6.1_57886.t1 | 1 | 1 | Tetraspannin | 9 | 235 | 0.0 | 159.5 | 0.0 | 0.0 | 159.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6.1_57886.t1 | gi|291232527|ref|XP_002736204.1| | PREDICTED: tetraspanin-3-like [Saccoglossus kowalevskii] | 7.00649e-44 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6.1_57886.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6.1_57886.t1 atggcgtctggttgtacagttacctctaagatattcctttgggcgttaggacttatattttggggagccgcagcaggatt attttttgtgggaggatgggtgttctcaacctacaaacattacaatgagatcacagaggccaactttaccctgataccag ctgttattatcatttgtgtgggcgtcttcctctttattattggcatcactagctgtgttgcagcttgtaaggaaaacaag tgtctcttggcttgtttgttctcaatgctactggttgttctcacagcagagataggagctggagccctgggttatgcctt caggaaagatgtagcggatgctgttgagaatggcctacacaaggcaatcagagaatatgaaagcggaacacttaaagatc aagttgactacttacaaaaagagttacactgctgtggattcaccaacgcatcagattggtttaaacctgatacaaaatgg caccttaaccatacctacgtccctgaaagttgctgtgcacactcaaattgttccctacaatcaaggacattgacatcaaa ctccacagcattctatgaagagggatgctacaacaagcttgaggatacactacagtcgaatctggcctacatagcaggaa ttgctattacatttgctgtaatccagatcctaggaatgattgccagttgcgtattattctgccgatccaaggaagtgaag tatgagccacttggaggtcaatatccaggactgagggtctaa |
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Protein
| Protein ID | pfu_aug1.0_6.1_57886.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6.1_57886.t1 MASGCTVTSKIFLWALGLIFWGAAAGLFFVGGWVFSTYKHYNEITEANFTLIPAVIIICVGVFLFIIGITSCVAACKENK CLLACLFSMLLVVLTAEIGAGALGYAFRKDVADAVENGLHKAIREYESGTLKDQVDYLQKELHCCGFTNASDWFKPDTKW HLNHTYVPESCCAHSNCSLQSRTLTSNSTAFYEEGCYNKLEDTLQSNLAYIAGIAITFAVIQILGMIASCVLFCRSKEVK YEPLGGQYPGLRV |
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