Gene
| Gene Model ID | pfu_aug1.0_60.1_29049 |
|---|---|
| Locus | scaffold60.1 : 2586 ... 10836 : + |
| To GenomeBrowser | scaffold60.1:2586..10836 |
| Genes list of scaffold | scaffold60.1 |
| Synonym | pfu_aug2.0_1445.1_18333 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | Beta-Mannanase |
| Description | NCBI BLASTP hit to 2C0H_A |
| mRNA evidence |
| Study field | other |
|---|---|
| Gene name | Full=Mannan endo-1,4-beta-mannosidase |
| Description | NCBI BLASTP hit to Q8WPJ2.1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_60.1_29049.t1 | 4 | 1 | Lectin_C | 7 | 41 | 2.4e-11 | 44.2 | 5.8e-06 | 0.017 | 15.7 |
| pfu_aug1.0_60.1_29049.t1 | 4 | 2 | Lectin_C | 51 | 81 | 2.4e-11 | 44.2 | 1.1e-06 | 0.0033 | 18.0 |
| pfu_aug1.0_60.1_29049.t1 | 4 | 3 | Lectin_C | 91 | 129 | 2.4e-11 | 44.2 | 5.6e-05 | 0.17 | 12.5 |
| pfu_aug1.0_60.1_29049.t1 | 1 | 1 | Cellulase | 207 | 432 | 4.2e-08 | 32.7 | 2.5e-11 | 7.4e-08 | 31.9 |
| pfu_aug1.0_60.1_29049.t1 | 4 | 4 | Lectin_C | 212 | 246 | 2.4e-11 | 44.2 | 0.55 | 1600.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_60.1_29049.t1 | gi|47606432|sp|Q8WPJ2.1|MANA_MYTED | Mannan endo-1,4-beta-mannosidase [Mytilus edulis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_60.1_29049.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_60.1_29049.t1 atggagcttatacggcggaacatgacattccatgacgcaggaaattactgcgtctcactgagagctcgtttagtgtccat acattctaatgctgaaaatcaacaagtgtacgctctctgcaagaacgatcatcatttaatgttagttcaacaaaagatga cctttcacaacgctgagaagtattgtgtcagcatgggaggccatattacgtccattcacagtgctgatgaacaagaacaa gtctacgatctctgtagaaagggcgagcctgataactggaatggtgtagaatcctgtgttataatgaaggtgaacaatca atacaacggtacatggtcagatcaagactgtgacgccgactatgacagatcttatttcgtctgtaagattcccaatggcg cagtggccccacaaaccaccactcctgttatacacactacaactcacgactctggggtatcaatcttgaccacactccca cacaatgtgcccaatgaccacaagcttcaaatatcaggaaacaattttgtattcggtggtaagaggatatttctatccgg tatcaacaaggcatgggaagcttatgcatacgactttggtcaggctcagtatcaatatcgtagacgagcttatcagaaag tatttcaggagatagaacaagctgggggaaattctgttcgaatatggattcacatggaaggagagacatcgccacagttt gactcatctggtcatgtgacgtcaactgatgagaaggggaccttaatcagtgacctgcggaccatgatacacgatgcaca gcagcacaatctttttgtgttcccttgcttgtggaacgctgctgtaaaacaaaactttcaccagcggcttgatgggttga taaaagacacaagcaagttacaatcctacatcgaccacgcccttattccgatggtaaaggctctgaagaacgagacagcc ctagggggttgggacattatgaacgagcctggaggagaaatgattcagaatgttttcagtagtgatccgtgtcaggatac tagattcctcgacaactcaggggcaggttgggcggggcatctttacaaagctgcagagttccaaagatttgtaaactggc aagctgacgccattaagcgtacagatccagacgccctggtcacattaggggtatggagtggacggcctaatatggacaag tttggatggaggaatatctacaaagactcgtgcctaaaacatgttggcggtaggccaatgggtacgctttctttctacca aattcacagttactcgtggcagggcaaattctcatcggactctccattcctggtaaaagagaatttcacttttaagaaca tttctaaatga |
|
Protein
| Protein ID | pfu_aug1.0_60.1_29049.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_60.1_29049.t1 MELIRRNMTFHDAGNYCVSLRARLVSIHSNAENQQVYALCKNDHHLMLVQQKMTFHNAEKYCVSMGGHITSIHSADEQEQ VYDLCRKGEPDNWNGVESCVIMKVNNQYNGTWSDQDCDADYDRSYFVCKIPNGAVAPQTTTPVIHTTTHDSGVSILTTLP HNVPNDHKLQISGNNFVFGGKRIFLSGINKAWEAYAYDFGQAQYQYRRRAYQKVFQEIEQAGGNSVRIWIHMEGETSPQF DSSGHVTSTDEKGTLISDLRTMIHDAQQHNLFVFPCLWNAAVKQNFHQRLDGLIKDTSKLQSYIDHALIPMVKALKNETA LGGWDIMNEPGGEMIQNVFSSDPCQDTRFLDNSGAGWAGHLYKAAEFQRFVNWQADAIKRTDPDALVTLGVWSGRPNMDK FGWRNIYKDSCLKHVGGRPMGTLSFYQIHSYSWQGKFSSDSPFLVKENFTFKNISK |
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