Gene
| Gene Model ID | pfu_aug1.0_6001.1_38252 |
|---|---|
| Locus | scaffold6001.1 : 6286 ... 45905 : + |
| To GenomeBrowser | scaffold6001.1:6286..45905 |
| Genes list of scaffold | scaffold6001.1 |
| Synonym | pfu_aug2.0_4153.1_12598 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6001.1_38252.t1 | 3 | 1 | Med14 | 1 | 39 | 6.0e-14 | 51.7 | 4.6e-12 | 6.8e-08 | 31.9 |
| pfu_aug1.0_6001.1_38252.t1 | 3 | 2 | Med14 | 39 | 82 | 6.0e-14 | 51.7 | 6.6e-09 | 9.8e-05 | 21.6 |
| pfu_aug1.0_6001.1_38252.t1 | 3 | 3 | Med14 | 1263 | 1305 | 6.0e-14 | 51.7 | 0.47 | 7000.0 | -4.0 |
Transcript
| Transcript ID | pfu_aug1.0_6001.1_38252.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6001.1_38252.t1 atggaacgtaaagtagagattgtacagtacgcctccaggacccggcaactgttcatcaggttactggcgctggtcaaatg ggcaggcagcgctactaaagtagataaatgtgcagacaagattgtcccacctgatgccataacaccgtcagagaaacgtc agacgttacaaagactgacgcaggtgatacagtaccgacttgtctccgctgaccttccccagcagatgcgtaaactcaga gtcggccacactgacattaatgggagatggacccaaggtaccttggagattattggacatcaacttcctggtagaagatc cagagactggagagaccagctaaggcgagacagatctggagagccgaccatacataatcttaaagtacacgttgccgatg acgatgatagtaaaccgttacagatcagccatcagcccagtatgtctgtggaggagagtaacagggtcggatctgctata aaggacctgtcaaaagaaatgcagagatatgtggaagatcaatgtgagctgagagatttacctatagcgttacatgttcc catcctcagtccatgtatgaactcggagaagttacggatcatgatagactctgaacgtgggacactccttgcttctattc cagtactctcagactttatacgacacttggtcaccaatgacgtccatcaacaagctatccacttctctggtacaggctgc caacaccatatccatttccgtggtaataagatcgtagcggtgagggacggagcatacagcttgtttgacaacagtaaagt ggtagatagttttacacctactcccatgcttaaggcatttttgaacatgtatgtggatgattccatcactggtcgtcaca cccatcgtatgtcagcgacggaggacgacaaccccccttcccccgttctgatggactcggtagacgtgtttaacatgtca cagccaccttctatgggatcacctgtgaccccatcaccatccacagctttgattggtacaccctccccagtgcgaagtct ggagtgcaaagtctggagtgcgaagtctgaacttacagccctgcagtcatcagatccctatatgaccttgtttaaagccg agacgctccagttccgagtctccttcaacaccagtaacttccagagtttacatatgaatgttactccactacctgaacat agcgccatatggactaccgaagtgctgaatattgtagagcagtactttgatcaaaaggttgcctgcccgccatacaaagt gaacgccctgagagcctttcttaggattctagacacaccccctagagttcttaaagactgtatacaactaatgaggttgg aactgaccccacaggcagtccttgacccgcgggcccagatgaagtggtccatgcagctctgtttaaccttaccaccagtg tgggcctacatggcctctgcagggaacgcagccgtggccaagggaaaacaacaaaaaatactgatgatgctacaatcata tgtgtgttatgacgtagaagtgttgaaaaagaaggtaggggactctgatagagtaacacctaatcttaaagtcagagatg ttgtttccctctttggcagatacattcgattttatatacgtgaagaacaaaatgatgaatcagatgaaaatggaaacttt caagtagaagaccccaatgtcaacaatgcaaaaactaatgcatttaccatattgatgaattcatcgacaaagatgtctct tcccccagcattaagcgaagatgggaaaatagccaacaacaaacgaacactgtataacaaggtactcaatatattgcaga gagcggagcttggttttaccccgtcaaatttccaatctggtcaacatatgattcaatcggtaacaaatgcattatggtac attgacccttttacggacagattcaatgagcgtggattgtaccatcctttactatttgaacatctggttgggttcaatga tccaggcaaacataaacacaagaaacagagaattgatagttccagtttacagggacatgcccaggatttggacttggtat tggatcaaacatggatagatgggttaacatggactccaattaaaaaatctattcaagaattatctcaaatgctacacaaa ttcattgaatatctcaaaaagaacaatgataagatgaaaagtaaccactcacaatcagttcctttgagatctgtagaaga tacacagtctatcaagattatcgctcctaagtatgtggttagaccaacattgtcaagtagatatagagccctaacatctc atctagatgctctgaatccttacgagcccatttgtgttgatgaatataccccagctgacagatacaaaaggaggtactat attgacaatttgaattgttcattatctcataaatgtattctttatcgtgtatcagcaggcaaccatcttggaacacacaa ttttctgtggaaaattccaacaaaccattctgaagaggaaaggtgcacaaaaaaccaagaggtaattcaggcaatatcaa aggatataccaaagtaccatactagggctatgcgtcgagcattcattcaacaaacagcactgatttgttccatgaagcct atgcatgctcgaaatatttacaaaacacttacaagtgacagttctgcttctgaaaatatgtgtgaaaaacaggttgatga aagagtttcacaggcattcttgcttcaggatccagacattgtgcaagaccttcgtgaacataaccagggtagacctccaa agtacagtgtttttttcgaaaaaactaaagaatacattgagtctgtcgttgaaactgctgttgatgatagacgacatgac aaattcacatatttagccacagctatatctgttcccgatttgaaacgtcaagttagtgctgtttgtccgccaaatactcc aattccgagtgaacaatggataaggttccagtttgccccaaagaatgctactacacaggcctcatcacaatacactggta aactgaatgtaaagttccaagtacaaagcaggcaactgcgtaaagacaatgttgacatgcattatgcatcggcaattttt cactatttaaaagaatttgcagtacgtttccgtgagaatacatctttcatttgtatggatgataagcaccattgtaaagt gggagagccaggtcatcctgtggctgctgtggagagaggaaggagagttatagttggacaagatagagtgtttgctgtgt cagaccatgactttacaaaatttagcattataccaagcgttactatgatgattgatataccagattccgtgtttggctct ttttatagagggcaagtgtatgttggagtaaaggacttgattttagagccttcttcaccactgcgacacattactgagct gtctgacattttggaaaaagaaaacaatggcaagcctattttgatcatctacatggatggtggccctgaccatcgcttga cttatttgtcagttcagctttgccttctatgtttattcttacaaggcaactatgacatgcttatcgctgcacgaactcca cccatgaattcttggaagaaccctccagagaggatcatgtctatcctgaatttagctctacagagtgttggacttatgcg ttcacagcaatcagatgaatttgagaagaagctgaatagtctgtctgggattggtcagctgagggaatatgcaggtctgt cggatgacaataaatcacaaatgatggataccattgaacctgttaaggtccttctgacaaaaatgtttgaaagactacag ctgaaagataaaggatttaagacatttcccccggcaccagaacaaaatatgcaaaacatgtggaagaacctggacatgta tggggaacctcctgaatacagcagaatgaggcaagctgatctgatgaaaagtttgaaggacaggccagagctgaaggctg tcattaaccactgcacagtgtccagatcatactttttttccattaaaaaatgtggagaaactgactgtaaaatctgcagg aagccagtcttgccccctgatgtctttgagaatttgcatcattttccagatccaataccaggagaggatgatcattacat gagctttgatgacctatatggaacccagaccacagaggagcaccggccttctttgaaatccaagcagagtgtcagcccag gtcaccagattccattttcacccagtgctcaaacaacaaaaacagtcaaatgtgcacttgtgtgtacagaatgcgaaaaa ccaagagttgtttattctgcaaaaactctatcgccaaaggatgcacaattgcttcttaggataaaacaactgtttcacta ttcatgtgggtcacaactccaagagctgaagacagctgataatagcacaccacagatcaatgctttgctagaaaaatgct atgttcgggccaacctgtcatgtgaaatggccattgaagttccatatttcagttctggatgctttccagatatatgttat tattgtggtgaatctgacgaaaatgtccttctcagggaggagggagcctatccaatttgttccaattgtaagaacaagca gaccactcctttgaaacgcaaacataatatgcgtgacagtcagaaaaacaaaagaaaagaaattaaatattgcatgtgtt ctattctggtttgtgcactgtccattgaacaatcacataatacatcgtattatggcatttga |
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Protein
| Protein ID | pfu_aug1.0_6001.1_38252.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6001.1_38252.t1 MERKVEIVQYASRTRQLFIRLLALVKWAGSATKVDKCADKIVPPDAITPSEKRQTLQRLTQVIQYRLVSADLPQQMRKLR VGHTDINGRWTQGTLEIIGHQLPGRRSRDWRDQLRRDRSGEPTIHNLKVHVADDDDSKPLQISHQPSMSVEESNRVGSAI KDLSKEMQRYVEDQCELRDLPIALHVPILSPCMNSEKLRIMIDSERGTLLASIPVLSDFIRHLVTNDVHQQAIHFSGTGC QHHIHFRGNKIVAVRDGAYSLFDNSKVVDSFTPTPMLKAFLNMYVDDSITGRHTHRMSATEDDNPPSPVLMDSVDVFNMS QPPSMGSPVTPSPSTALIGTPSPVRSLECKVWSAKSELTALQSSDPYMTLFKAETLQFRVSFNTSNFQSLHMNVTPLPEH SAIWTTEVLNIVEQYFDQKVACPPYKVNALRAFLRILDTPPRVLKDCIQLMRLELTPQAVLDPRAQMKWSMQLCLTLPPV WAYMASAGNAAVAKGKQQKILMMLQSYVCYDVEVLKKKVGDSDRVTPNLKVRDVVSLFGRYIRFYIREEQNDESDENGNF QVEDPNVNNAKTNAFTILMNSSTKMSLPPALSEDGKIANNKRTLYNKVLNILQRAELGFTPSNFQSGQHMIQSVTNALWY IDPFTDRFNERGLYHPLLFEHLVGFNDPGKHKHKKQRIDSSSLQGHAQDLDLVLDQTWIDGLTWTPIKKSIQELSQMLHK FIEYLKKNNDKMKSNHSQSVPLRSVEDTQSIKIIAPKYVVRPTLSSRYRALTSHLDALNPYEPICVDEYTPADRYKRRYY IDNLNCSLSHKCILYRVSAGNHLGTHNFLWKIPTNHSEEERCTKNQEVIQAISKDIPKYHTRAMRRAFIQQTALICSMKP MHARNIYKTLTSDSSASENMCEKQVDERVSQAFLLQDPDIVQDLREHNQGRPPKYSVFFEKTKEYIESVVETAVDDRRHD KFTYLATAISVPDLKRQVSAVCPPNTPIPSEQWIRFQFAPKNATTQASSQYTGKLNVKFQVQSRQLRKDNVDMHYASAIF HYLKEFAVRFRENTSFICMDDKHHCKVGEPGHPVAAVERGRRVIVGQDRVFAVSDHDFTKFSIIPSVTMMIDIPDSVFGS FYRGQVYVGVKDLILEPSSPLRHITELSDILEKENNGKPILIIYMDGGPDHRLTYLSVQLCLLCLFLQGNYDMLIAARTP PMNSWKNPPERIMSILNLALQSVGLMRSQQSDEFEKKLNSLSGIGQLREYAGLSDDNKSQMMDTIEPVKVLLTKMFERLQ LKDKGFKTFPPAPEQNMQNMWKNLDMYGEPPEYSRMRQADLMKSLKDRPELKAVINHCTVSRSYFFSIKKCGETDCKICR KPVLPPDVFENLHHFPDPIPGEDDHYMSFDDLYGTQTTEEHRPSLKSKQSVSPGHQIPFSPSAQTTKTVKCALVCTECEK PRVVYSAKTLSPKDAQLLLRIKQLFHYSCGSQLQELKTADNSTPQINALLEKCYVRANLSCEMAIEVPYFSSGCFPDICY YCGESDENVLLREEGAYPICSNCKNKQTTPLKRKHNMRDSQKNKRKEIKYCMCSILVCALSIEQSHNTSYYGI |
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