Gene
| Gene Model ID | pfu_aug1.0_6003.1_02137 |
|---|---|
| Locus | scaffold6003.1 : 15879 ... 25585 : - |
| To GenomeBrowser | scaffold6003.1:15879..25585 |
| Genes list of scaffold | scaffold6003.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6003.1_02137.t1 | 4 | 1 | C1_1 | 46 | 97 | 7.2e-08 | 32.0 | 2.9e-11 | 7.2e-08 | 32.0 |
| pfu_aug1.0_6003.1_02137.t1 | 3 | 1 | DUF4206 | 56 | 97 | 2.5e-39 | 134.9 | 0.0016 | 4.0 | 6.9 |
| pfu_aug1.0_6003.1_02137.t1 | 4 | 2 | C1_1 | 112 | 128 | 7.2e-08 | 32.0 | 0.021 | 52.0 | 3.6 |
| pfu_aug1.0_6003.1_02137.t1 | 4 | 3 | C1_1 | 121 | 155 | 7.2e-08 | 32.0 | 0.035 | 86.0 | 2.9 |
| pfu_aug1.0_6003.1_02137.t1 | 3 | 2 | DUF4206 | 141 | 214 | 2.5e-39 | 134.9 | 8.2e-30 | 2.0e-26 | 92.7 |
| pfu_aug1.0_6003.1_02137.t1 | 3 | 3 | DUF4206 | 213 | 271 | 2.5e-39 | 134.9 | 1.7e-17 | 4.2e-14 | 52.5 |
| pfu_aug1.0_6003.1_02137.t1 | 4 | 4 | C1_1 | 223 | 262 | 7.2e-08 | 32.0 | 0.00029 | 0.72 | 9.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6003.1_02137.t1 | gi|109129545|ref|XP_001092223.1| | PREDICTED: differentially expressed in FDCP 8 homolog isoform 3 [Macaca mulatta] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6003.1_02137.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6003.1_02137.t1 atgatagctgaagctccgcccaattctgacagagtcaaaaacttggttcagaaactaatacagctcagacttaaactaca ggagctgaaggaggggccacccccagtaccaggtgacgtgaagccggttgttggtcatcgatttgtaattcagaaaagcc gtagctccaagtattactgtgagaagtgtaatgccatgatactgggcgtcatacaaacttggtacaggtgtactgaatgt ggatatagctgccatgagaagtgccttaataacatcacaaggacatgtgcaagtcagaaggttttggagaatccgacatt ctgcctattgatttgtcctaaccggggtctgtctgctcagaattacagatgtgctgaatgtcgcacacagatatcattta agccaggattcagtgaaccacgactctgtgattactcaggcatgtatttttgtgatctttgccattggaacgatactatg atcattccagccagggtgctacataactgggactttgaacctcgaaaggtttgtcgagcatcaaaacagtttctgaaact gatgacgaccaaggcagtatgtaggatacaggatgttaaccccatgttgtttaactttgtagaggaactcagtgaagtta agctgtgccaagccaagggatttatgtgtgagctgtgtgacaataaagaaacattgtttccatttgataacattgccgta gtgtgctctcagtgcacgtatgtgttacacagacactgctatgcaaagaaaggtgcccaatgtccaagatgtgaaagaag aagtaaacggaaggcaaactag |
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Protein
| Protein ID | pfu_aug1.0_6003.1_02137.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6003.1_02137.t1 MIAEAPPNSDRVKNLVQKLIQLRLKLQELKEGPPPVPGDVKPVVGHRFVIQKSRSSKYYCEKCNAMILGVIQTWYRCTEC GYSCHEKCLNNITRTCASQKVLENPTFCLLICPNRGLSAQNYRCAECRTQISFKPGFSEPRLCDYSGMYFCDLCHWNDTM IIPARVLHNWDFEPRKVCRASKQFLKLMTTKAVCRIQDVNPMLFNFVEELSEVKLCQAKGFMCELCDNKETLFPFDNIAV VCSQCTYVLHRHCYAKKGAQCPRCERRSKRKAN |
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