Gene
| Gene Model ID | pfu_aug1.0_6004.1_67360 |
|---|---|
| Locus | scaffold6004.1 : 41526 ... 48077 : + |
| To GenomeBrowser | scaffold6004.1:41526..48077 |
| Genes list of scaffold | scaffold6004.1 |
| Synonym | pfu_aug2.0_1410.1_01611 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6004.1_67360.t1 | 1 | 1 | NACHT | 196 | 285 | 1.5e-10 | 40.9 | 1.1e-13 | 2.7e-10 | 40.1 |
Transcript
| Transcript ID | pfu_aug1.0_6004.1_67360.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6004.1_67360.t1 atgacagcgtctatggaaaatcttgagattagttcgctttatattcctttgaggcctcctgagcttaacgaaccttctga acctcgtagaccctctgaagcgcctgaatatcctagatttcatgaacattctaatcctcatagaccttatgaacctcata agcctcctgagaacccggaaaccaatgagcctccagaattttatgagtctcgtaaactgcctagaccatatggaccatct gtacctcctggaactgtgagtagtttccctcttacgaaagctatgcttcccagtgcttcttctcccatgaaaatcctact gtatgaaatcaataaacagttttctgagacaccgaccgtcatatcgcacctgtttcaatcggaagatgtaaggaaaaatg atcatttatttgcttcagtttgcttaaagaaatacaacggtcctgttgacgaatctcactttttccatccgaaattcatg agaaaaatggaaaacctaccacgtgaaatattctgtacgtctgacgaatatccttggaaaggtctgtatagcaaaactta ccatttatcaagaacaaaatccacatatttgttcatactaggggaagctggatgtggtaaaacaagctactgtcaacatc tagtaaggcaatggtgccaaggacaggatttacgaaaatttgatcatatcttttatgttgatacttccgttttgcaaacc tcgaagacatcgatatctgatattatttttactgctgtttttggaaacacttttgtctctgaaaacgaagttaatcatgt tctacgaaatgaaaaatgtcttattttgattgacggagatgacatcttcagagaaagattgattcgaaaatattatttag aggaggtcattatggagtatcgcaattgtgtttttgtctttcttttgagacctctgcagtttgtgaaatcattttcttta tttgaactaagagatgtcaatgctcatttcatacagttatcgggattagatgaaaagggaatggtatcattgtacagtaa tatcatagtcaaaattgattttttcatacaatccaaatctccacatgaaataaagatagcagattctcaacaaataatga agaagtcgactttacaaaaggaaacgaaagaaccagataccgctctttctgaaacagaatcctatctttttcatggtgaa ggtgaagcagatacccaagcttatattgcacaaaatccaaccgaatcggagcagcgagtgaaaaaatcaggtattggcga atctgcgaaggaagcaggtattaagccaaaaactgagaaatatgtttcggaacatggcagaaagaaattggagttttata gaataaaaggagttttggaaaaaatactttgtgaaaattacaattcgataatgcaaataccaatgtttggatgtgtctgt gttggattgcttgcagaagggaatgacttgccaacaaacctgaccagcgtttatctttgtcttcttgatagacttgtagg agaacatgaacctctgtctggtagaaaaggcgaaaaaggtataaaaccgtttgacctgtttttgacttatgagaatgtac atcgtcatgtagaaacactccgtaaattaggcaacattgcctttgattcaatattatttttcttttcacaattagtagat tacaacacgttagatggttatttaggagagacagaaataaattttgcgattagaaccggtctccttgtccccgaagaaac atttaaggatgcgatggccaacgagcagaatgtccgttttttacacaaaactattcaagattctttggtttccatatata tagttatagaaaaagaagaagcagttgactccttctgtcatcagttgaccaatatggacgtaataatatatgtctcacat gtaatcatgatggtctgtggtctaaatccgaacctaggctgtcgtatgacaaggagcattaaggacgttctcgataaaga cataaacgtatgtcgtcacaggcaagatatatctgtggactcatttatgagagaattttactatctacaactgagctggt acatcgagtataaagatggggtaacgattattggaagtgatgcaaaagacaatttttatgtgtcagacatctacgttgat gataaaactgacaaagaaacaatgaccaagacgattgctcttctgtctgataaaaatattatagctacttcagtgtacat cgacaacgtgtctaccgaaagctacttgacagacaaagtgctgaacgatttcttggtattcaatacatcattagaaacga tatacattaattcataccaaagccacagatcaatagtgccgttatcctttcccttcttgagagtgttaaaattgtggcat gtgcacattcgacctgcctgtaatgaggatgaggcgacaaagccgctgctttataacttaccaatgttacagaggcttga tgtgtttgaaatagttctgaacaaaaggctactagggttgacatctgacggagggataatgccagtgttgaattatgtct tgattaatggagtagacatgagtgaccaatcaattgagtttgcaccggacatgacagacattgaaaatatccatcttcat ggtgtaaagatgtcatcacagggctggatgaagtttataagatcactcctcaatattcatcattcctatcaagtaagtct atatgattcagatattgatactgaatcacaagacatggtccgaacgaataaagtttttggagtgatgcaagatgatagct actgctttgaattctgcagaataaatccaaggatatcgcaccattga |
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Protein
| Protein ID | pfu_aug1.0_6004.1_67360.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6004.1_67360.t1 MTASMENLEISSLYIPLRPPELNEPSEPRRPSEAPEYPRFHEHSNPHRPYEPHKPPENPETNEPPEFYESRKLPRPYGPS VPPGTVSSFPLTKAMLPSASSPMKILLYEINKQFSETPTVISHLFQSEDVRKNDHLFASVCLKKYNGPVDESHFFHPKFM RKMENLPREIFCTSDEYPWKGLYSKTYHLSRTKSTYLFILGEAGCGKTSYCQHLVRQWCQGQDLRKFDHIFYVDTSVLQT SKTSISDIIFTAVFGNTFVSENEVNHVLRNEKCLILIDGDDIFRERLIRKYYLEEVIMEYRNCVFVFLLRPLQFVKSFSL FELRDVNAHFIQLSGLDEKGMVSLYSNIIVKIDFFIQSKSPHEIKIADSQQIMKKSTLQKETKEPDTALSETESYLFHGE GEADTQAYIAQNPTESEQRVKKSGIGESAKEAGIKPKTEKYVSEHGRKKLEFYRIKGVLEKILCENYNSIMQIPMFGCVC VGLLAEGNDLPTNLTSVYLCLLDRLVGEHEPLSGRKGEKGIKPFDLFLTYENVHRHVETLRKLGNIAFDSILFFFSQLVD YNTLDGYLGETEINFAIRTGLLVPEETFKDAMANEQNVRFLHKTIQDSLVSIYIVIEKEEAVDSFCHQLTNMDVIIYVSH VIMMVCGLNPNLGCRMTRSIKDVLDKDINVCRHRQDISVDSFMREFYYLQLSWYIEYKDGVTIIGSDAKDNFYVSDIYVD DKTDKETMTKTIALLSDKNIIATSVYIDNVSTESYLTDKVLNDFLVFNTSLETIYINSYQSHRSIVPLSFPFLRVLKLWH VHIRPACNEDEATKPLLYNLPMLQRLDVFEIVLNKRLLGLTSDGGIMPVLNYVLINGVDMSDQSIEFAPDMTDIENIHLH GVKMSSQGWMKFIRSLLNIHHSYQVSLYDSDIDTESQDMVRTNKVFGVMQDDSYCFEFCRINPRISHH |
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