Gene
| Gene Model ID | pfu_aug1.0_6013.1_23936 |
|---|---|
| Locus | scaffold6013.1 : 8876 ... 11688 : + |
| To GenomeBrowser | scaffold6013.1:8876..11688 |
| Genes list of scaffold | scaffold6013.1 |
| Synonym | pfu_aug2.0_1374.1_15002 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6013.1_23936.t1 | 1 | 1 | Homeobox | 288 | 344 | 5.8e-08 | 32.2 | 3.5e-11 | 1.7e-07 | 30.7 |
| pfu_aug1.0_6013.1_23936.t1 | 1 | 1 | Homeobox_KN | 304 | 343 | 2.5e-08 | 33.4 | 1.5e-11 | 7.5e-08 | 31.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6013.1_23936.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6013.1_23936.t1 atggatgtaagtgcttcttcagttgacaccgttccctcaccgtcaccatgccaggaaccggtcatagatcttaccaaggt cgtagctgagactatatttgacattagttctgatatcaccagtgatagttgtagtgaccttgaggatgacctctccagca tcaccgatgtctttgatccaacacagtgttaccatgatgacgacgtcaaaccaacgtgcgcttatcagtcaccgacgtgt ctggaccgcctaccggagttcatcaccagtagcgatgtggttgccatggatattacgcttgacgtcattccaaaatgtga ggacattagtgccatgttgagcgatgtctatttcgattcagacgattcatacgagaagcctctaggagctgtatccctgt ccgatagttttacgtgtgactctcgttttaatgattcactcacatcgcttctcgattctccagcctccacggatttaccg cttagtggacttgaacatgttatctcggacagtagttcagagttttctcaggatttatttaactctctcgttactcaacc taatgtggatatatttaagcgtgagacccagctatccgacagaattgtgaagttagagccacactatcctcaggacatta agcagctatcggacttttaccgctatcaggcttctttagtggaaatggaacgttataaggcgctgaatcagggacattac tccgttgatcaccagtgcaagttgaaccttcattttgactctcagcttcacgatattatggaccgtgtcgaacagagttt atgtttattggaggaatcattacgtgtaccaacgaaagtgaagacatcagtgcgatccgtcaaaccacgccctcttctct caaagaaggccgtgcgcatcatggaacagtggtacgatgacaatttggagcacccctacccaaccccggccgcttacgat gctatcgccgtggagggaggtattgccgtggaacaagtcaagaagtggttcgccaacaaacgtaacaggtcccacaacac acgcagcctgactgagatcgccaagaagaaacgtcagattgcctatgcgacagatcagcgcttgaactgtaaacttgaga gaactttaagtgctaattgtaaaaaagaaatttgctattcattagagactggtgccaatttatttgttgttacattaagt atttatcttgttgtctgttaa |
|
Protein
| Protein ID | pfu_aug1.0_6013.1_23936.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6013.1_23936.t1 MDVSASSVDTVPSPSPCQEPVIDLTKVVAETIFDISSDITSDSCSDLEDDLSSITDVFDPTQCYHDDDVKPTCAYQSPTC LDRLPEFITSSDVVAMDITLDVIPKCEDISAMLSDVYFDSDDSYEKPLGAVSLSDSFTCDSRFNDSLTSLLDSPASTDLP LSGLEHVISDSSSEFSQDLFNSLVTQPNVDIFKRETQLSDRIVKLEPHYPQDIKQLSDFYRYQASLVEMERYKALNQGHY SVDHQCKLNLHFDSQLHDIMDRVEQSLCLLEESLRVPTKVKTSVRSVKPRPLLSKKAVRIMEQWYDDNLEHPYPTPAAYD AIAVEGGIAVEQVKKWFANKRNRSHNTRSLTEIAKKKRQIAYATDQRLNCKLERTLSANCKKEICYSLETGANLFVVTLS IYLVVC |
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