Gene
| Gene Model ID | pfu_aug1.0_604.1_00419 |
|---|---|
| Locus | scaffold604.1 : 68515 ... 75575 : - |
| To GenomeBrowser | scaffold604.1:68515..75575 |
| Genes list of scaffold | scaffold604.1 |
| Synonym | pfu_aug2.0_403.1_10738 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_604.1_00419.t1 | 1 | 1 | 7tm_1 | 2 | 249 | 2.9e-20 | 72.5 | 1.6e-23 | 3.4e-20 | 72.2 |
| pfu_aug1.0_604.1_00419.t1 | 1 | 1 | 7TM_GPCR_Srsx | 2 | 264 | 3.8e-06 | 26.2 | 2.9e-09 | 6.1e-06 | 25.5 |
| pfu_aug1.0_604.1_00419.t1 | 1 | 1 | 7TM_GPCR_Srw | 4 | 265 | 1.7e-15 | 57.0 | 9.8e-19 | 2.1e-15 | 56.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_604.1_00419.t1 | gi|242011920|ref|XP_002426691.1| | class A rhodopsin-like G-protein coupled receptor GPRnna13, putative [Pediculus humanus corporis] | 1.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_604.1_00419.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_604.1_00419.t1 atgaaaaacatgcagacatccaccaacgcctttctctctgctctggctgtggccgacataatcaaattaaccaatgacat tctgtatttcttcgttctgttgttaatgagaatcgacaaggacgcagcacagactgcatacgttcacatatatccacaag cgcactttatcttcaatttttcattatgtgtatcgtcatggctaactgttacagtggcagtggagagattcatcttggtt tgttttcctacaaaagccaaattcatctgcacaaggagtcgcgctatcatcacatgtgttattgtgtatctagtaatggt ttgcttctcgctgccatgtgccttccgatacaagacaatttacgtttacaacaacgaaacgggtgcgacaattcaagatt tagaagtcagtgaaatgtggtcggacaaatatttcgttaccatatacacatggatcctaaattcattacgatgtaatatt cccttgttcatactcatcattctcaacacatgtattatatgctcaatgaggaaagcgcgcgctaaaaagaacaattcccg ccgaaaccgagttacattcatgatgattacgatcataatgtgctttcttgtttttacgacaccagacgctataatgtcaa catttttgaagtacgggtaccacgaggccaataattacgtgaagggaatgagggagtttacagacactctactgacagtc aatgctgctgttaattttatcatctattgctggtttggttatactttccgacaaaacttcaagaaactgttctgtcaacg accctctcgtggaaaggaggtgttcgtgtaa |
|
Protein
| Protein ID | pfu_aug1.0_604.1_00419.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_604.1_00419.t1 MKNMQTSTNAFLSALAVADIIKLTNDILYFFVLLLMRIDKDAAQTAYVHIYPQAHFIFNFSLCVSSWLTVTVAVERFILV CFPTKAKFICTRSRAIITCVIVYLVMVCFSLPCAFRYKTIYVYNNETGATIQDLEVSEMWSDKYFVTIYTWILNSLRCNI PLFILIILNTCIICSMRKARAKKNNSRRNRVTFMMITIIMCFLVFTTPDAIMSTFLKYGYHEANNYVKGMREFTDTLLTV NAAVNFIIYCWFGYTFRQNFKKLFCQRPSRGKEVFV |
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