Gene
| Gene Model ID | pfu_aug1.0_6049.1_38259 |
|---|---|
| Locus | scaffold6049.1 : 11476 ... 45285 : + |
| To GenomeBrowser | scaffold6049.1:11476..45285 |
| Genes list of scaffold | scaffold6049.1 |
| Synonym | pfu_aug2.0_652.1_07763 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6049.1_38259.t1 | 1 | 1 | DUF3437 | 931 | 974 | 9.8e-15 | 54.0 | 7.8e-18 | 3.9e-14 | 52.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6049.1_38259.t1 | gi|291230564|ref|XP_002735236.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6049.1_38259.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6049.1_38259.t1 atgttcagcaagttcggcagtcatgactcagctatagcacttagatatctgtccaacatgagacctgaaattgtcgtgcc agatctgctagaaaaagtgtttctgttgatagagaacagtgctcaagaacactctcatgtagagacgacacgtctcaact ctgaacaaaccatggtcgaaatggccttaacatctactttcacttcagttttgcaacagtgttctgctccaatttaccag tcagccttacgtcgtttgtttaacttcgtgtcaaacagtgtgtatgaaatcaaagttggagggagattcacgtcaaattt atgcagggcagcagctagggtgaatcctcaggcagcagtgaagacatttttacctctattttgcagaaacattaaagaac acatggactctcatgagggcatagaaaaggaggaacatttagacaatggctttctctggaaccttcaaatgttggctcag ctcgtcagatgcaatgggaaagtgctactaccatacagagaagacttattgtcagtgctttcattaacgctacacttgaa gtgtatacaagggtacgaattagctggacagttactaagatttgtgcttcgagctttaacattacattaccctttggatt acaagagcattgcagaatcttttgacaggccagtgacggagtaccttgccatcaatgactgggcaatgccaggtgatatt tataacctgaacgttgagtggcatataccgtcatcagaggaaattagctacgctcataccataatcaactctctacttgg gatggagttagatattatagcaaaaatacaagaggctcctgttgagagagcggagctagagttggagagcaagatatttg aaacggtgctatttttctttggcgcatccaagccagactttgatgctcgatggaaaagtttccattctgtgaaggaagca gtggaggacaagctacgcatgctgcatagtaatagccgagtgttcacagaactacacaagaaaatcttactacagttgta tggactctccctcagccgatatggagaggtgcggaaaaaagctcaagctgtgctgtgttctatccatacaaattacgcct actcctataggtgtatacttgatgaccttgcagaaaaactggtgaacagtaatactcccgaaaaacagtttaaaggtgcc ttgtatgttatctatggtaacggcagatataacctagcagccaagaggagttggaaagtgatcggaaagctgtggccggc cattgtccaagctcaacactttgagaagccatctatactcaaaatagtggacgatatcgttatcaaggtgtctaaaggca tggaaagtcctgccatcagaatcaatactaccagtggttgtatagctgcagccaagtgcctgttagaacgtagagtgcca aatcctaaccagagtcaactagtggaacaagatctaaaagaaggtgttcagtatgaagaaaagaggaatgatcaagctaa aggattgtaccatcagcttacatcagagttggtatcactagtcaagtcaggaaatctagagatgaaggtgtatgctgatt cttcccagcagccaaagctggacaggactctggacgagctgccgacagaggagaaacccatctacacgtgcctagccgat aaaaacttcgttagtaagtttgtggaacttcttgcattggaggaacacaaaggcagagataaattcagggaaaagcattc aacacttctgaagacgaaagccttgtgggactgggcatcagtcatcatagcagacatactgaaaaagatgactcccgaga cccagaaagactggggtacattcttcactgtgatatcagagagtcgggatccaaggaagttacactggttgtttgaactc ttactgaaggaacctgtactagagggaaactcgtcaatgcatgatacaagtcggttgtttgccatcaccagtgccatagt acagcaggaatggaggataccagacatcctggataggctactgaaacaaactctgatgaaaaacctctcacatagatata aaaacgtcagggatagaattggcattttgctgtccagtatatttctatacgactacaaggtatcaccagaatgctgtaca cagagtccacgtagacaagattttgtagatgttgttatcagagatttagacccactgaaagactcggttctaacagaaaa tggaaattctctggtgatgaaatggttgtccaatggaatgggtaaaatgtacacatccatgccatctgaacttctacagt tcttgccaataatctgtgctttggaatacgaaaccaaggatgaggagttgaagtcagactgttgtatggcgttagcgtgc ttctctcaggcactgatacaaccagacacgatgcaggcagcactccatgcgatcaaagaggcagcactccatgctatcaa agaggtgataggcctgaaatcgtggcatgccagagttgcagttcttggctacatacaggtgatggtgttctgtaatttct tcacattccacaagccggagtacaaacataaaatccaggaatttgtcttccatcttatatgtgacgatcagctagaggtg agggagatggcagcagtaacattgagtggattgttgcattgtgggtacctgaagatgaaccaagacatggtgaaccattt tgagagtctgagcaagaacaagttaagacgtaggaaaggagttacccaggaccccgttgacttgtccgtgttgataaagc gacacgctggcgtactcggactgagcgcctttgtacaggcctacccttacgatgtaccagagtttatgccacagatattg atggatcttagtaatcatgttaatgatccacaacccatacag |
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Protein
| Protein ID | pfu_aug1.0_6049.1_38259.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6049.1_38259.t1 MFSKFGSHDSAIALRYLSNMRPEIVVPDLLEKVFLLIENSAQEHSHVETTRLNSEQTMVEMALTSTFTSVLQQCSAPIYQ SALRRLFNFVSNSVYEIKVGGRFTSNLCRAAARVNPQAAVKTFLPLFCRNIKEHMDSHEGIEKEEHLDNGFLWNLQMLAQ LVRCNGKVLLPYREDLLSVLSLTLHLKCIQGYELAGQLLRFVLRALTLHYPLDYKSIAESFDRPVTEYLAINDWAMPGDI YNLNVEWHIPSSEEISYAHTIINSLLGMELDIIAKIQEAPVERAELELESKIFETVLFFFGASKPDFDARWKSFHSVKEA VEDKLRMLHSNSRVFTELHKKILLQLYGLSLSRYGEVRKKAQAVLCSIHTNYAYSYRCILDDLAEKLVNSNTPEKQFKGA LYVIYGNGRYNLAAKRSWKVIGKLWPAIVQAQHFEKPSILKIVDDIVIKVSKGMESPAIRINTTSGCIAAAKCLLERRVP NPNQSQLVEQDLKEGVQYEEKRNDQAKGLYHQLTSELVSLVKSGNLEMKVYADSSQQPKLDRTLDELPTEEKPIYTCLAD KNFVSKFVELLALEEHKGRDKFREKHSTLLKTKALWDWASVIIADILKKMTPETQKDWGTFFTVISESRDPRKLHWLFEL LLKEPVLEGNSSMHDTSRLFAITSAIVQQEWRIPDILDRLLKQTLMKNLSHRYKNVRDRIGILLSSIFLYDYKVSPECCT QSPRRQDFVDVVIRDLDPLKDSVLTENGNSLVMKWLSNGMGKMYTSMPSELLQFLPIICALEYETKDEELKSDCCMALAC FSQALIQPDTMQAALHAIKEAALHAIKEVIGLKSWHARVAVLGYIQVMVFCNFFTFHKPEYKHKIQEFVFHLICDDQLEV REMAAVTLSGLLHCGYLKMNQDMVNHFESLSKNKLRRRKGVTQDPVDLSVLIKRHAGVLGLSAFVQAYPYDVPEFMPQIL MDLSNHVNDPQPIQ |
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