Gene
| Gene Model ID | pfu_aug1.0_6055.1_52691 |
|---|---|
| Locus | scaffold6055.1 : 17356 ... 20865 : - |
| To GenomeBrowser | scaffold6055.1:17356..20865 |
| Genes list of scaffold | scaffold6055.1 |
| Synonym | pfu_aug2.0_803.1_11194 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6055.1_52691.t1 | 1 | 1 | Tropomodulin | 12 | 135 | 2.6e-36 | 124.3 | 3.8e-40 | 2.8e-36 | 124.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6055.1_52691.t1 | gi|226468588|emb|CAX69971.1| | Tropomodulin [Schistosoma japonicum] | 1.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6055.1_52691.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6055.1_52691.t1 atggagaaatcagccctgaaacccgtccatgatgtacctgatatagacatagacgacatagacaaactcctgtctgaact gtcagccgaggaaatagaagaactcaatggagacttcgaccctgataactccttgctgccaccaagccagaggatgaagg accagacaaagaaaaatcctacagggccgtttcagcgtaaaaaactaatggaatttctggaacggaaagcaaaggaagag aaagactgggaacagaataaacctttcgttaaagaaatcagaggaaaagtatggaagcctaaagaggaaccaaaagcgaa gattaacgatgatgagagcgttgatactgaatgggacgcaattctaaatgaagcttcagaggaggaacttgtcgatttgg ctggtaaatga |
|
Protein
| Protein ID | pfu_aug1.0_6055.1_52691.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6055.1_52691.t1 MEKSALKPVHDVPDIDIDDIDKLLSELSAEEIEELNGDFDPDNSLLPPSQRMKDQTKKNPTGPFQRKKLMEFLERKAKEE KDWEQNKPFVKEIRGKVWKPKEEPKAKINDDESVDTEWDAILNEASEEELVDLAGK |
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