Gene
| Gene Model ID | pfu_aug1.0_6061.1_16826 |
|---|---|
| Locus | scaffold6061.1 : 19276 ... 29469 : + |
| To GenomeBrowser | scaffold6061.1:19276..29469 |
| Genes list of scaffold | scaffold6061.1 |
| Synonym | pfu_aug2.0_10.1_00041 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6061.1_16826.t1 | 2 | 1 | Na_Ca_ex | 57 | 216 | 1.4013e-45 | 154.2 | 1.2e-27 | 5.9e-24 | 84.2 |
| pfu_aug1.0_6061.1_16826.t1 | 2 | 1 | Calx-beta | 354 | 408 | 4.7e-31 | 106.7 | 9.5e-13 | 4.7e-09 | 36.1 |
| pfu_aug1.0_6061.1_16826.t1 | 2 | 2 | Calx-beta | 429 | 526 | 4.7e-31 | 106.7 | 1.4e-22 | 6.8e-19 | 67.6 |
| pfu_aug1.0_6061.1_16826.t1 | 2 | 2 | Na_Ca_ex | 633 | 787 | 1.4013e-45 | 154.2 | 4.6e-25 | 2.3e-21 | 75.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_6061.1_16826.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6061.1_16826.t1 atgagtaacaatacaacgtctacgaccctacctacaaccacgcccttcaatatcgaggactacgtgtgccgagaaaaggg gaaacttctgcccgtcatcaatgagtacacgtggtctcctggaacccgcgcttttttatatctgctcttcttactttgga gttttatgggcgtggctattatagccgatgtgtttatgtgtgctattgaaaggattacaagtaaaacagccaaagtacgt gtccccgaccctgacgctccggagggattcagaatcttacgagttaaagtttggaatgacaccgtggccaacctcagctt gttggctcttggtactagtgcaccagaaattttgctctctgttattgagattgtaggagctgggttcgaagccggagaac ttggacctggaacaattgttggatctgcttcttttaatcttttggtcataggagctatttgtatctactctatacctgat ggagaagtcagacagatcgcgaatctgaaagtgttcgccgtgacgacttttagttgtatttttgcgtatgtttggcttac cttagttttattggtgatcacgccgggatacgttacactatgggaggccattattacatttcttatgtttccagctctaa ttttcgtagcttacatggccgatcgagattgttgtatgaaaaaagtggaattagaagaaaatggcatggttgggatttct ctgaacgacaaggaggagaggcgaccagcattaaccaaacaagagtcgtctggcgagggaaccatcatgaaacttgctaa ggaactcggtcacgagtcgttcgaccaaggtctgccagaggaagaagccgcgaaaatagcagccgcgaaaatacaggagc accagcaccatgaccgattatggtaccgtataaatgctacacgtggtgtcagcggtgggaagaagcttattccaagggtt ctaaccaccttccaaaagtacaacctaatagataccagttacctaggaaatatcatcttcgcaagcaaaggagaacccaa ttcggtggggctttttttatcctttacagtagagaccataaacggtacagccgtagcccccgaggactacatccatctag aggaggtgattgaattcgccgccaatgaacagctacgacagttgtacatacagattgtggatgataatgaatgggaacca gacgagttcttctttgtcaagctagccctgacacacgacgaggaaactaacgagagcgtagtgctaggaccagtgtcaat ttcacaaatcacaatcattaatgatgacgaacccggaaaacttgaattcgctaagccaagtatcatcgccaaggaaagcg gacgtcatgtgagaattcctgtaaaccgtatccatggtgccgatggtcacgtgtctgtcaagtggagaaccaaggacatc actgctatcagtggtgtggattacgaaggaggagagggagagctgaagtttgaccatggcgaaactaccaaaaatatcga cattcatatccatgacactaataaagatgagagagatgaaagttttgaagtagagttaggtgaaactgacggaggagcag agctagccaagatcaagaaaactattgtcaccatcgttaatgatgaagaatttaacggactggtcagcaggatagtcaat cttaccaaagccaacttagacgccctacaactggaggactcgacatgggtcagtcagtttaagacagccatgaacgttaa tggcggagatctggagacggccacttttgtggactacattttacatttttgcacgttcttttggaagattctgtttgcct ttgtgccaccacccaaatacctaggcggttggccagccttcattctatccctcgctgtgattggtctaatgacggcgctc attggagatgcagctagcatattcggttgtttgattggtctaaaagactccatcaccgccatttctatcgttgccttggg aaccagtatgccggatacgttcgctagtaaaacagcggccgtgaacgagaagacagcggatagctctattggtaacatca acggaagtaactccgtcaatgtattcctcgggctgggtctgtcgtggcttatagcgactatttatcatctagtaaaaact ggttcggattttgaagtgccagcaaagactcttgctttctctgttgttctctacacggtggcagccattgtagcaatagt gcttttggttcttagaaggacattacccatatttggtaatgccgaactcggcggacctaaagttcctaaaatattctgta gtatcatattcttctcactgtggctgttttatttattgatgtccattttaaaagcttacgatatcattactgtgaatatt taa |
|
Protein
| Protein ID | pfu_aug1.0_6061.1_16826.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6061.1_16826.t1 MSNNTTSTTLPTTTPFNIEDYVCREKGKLLPVINEYTWSPGTRAFLYLLFLLWSFMGVAIIADVFMCAIERITSKTAKVR VPDPDAPEGFRILRVKVWNDTVANLSLLALGTSAPEILLSVIEIVGAGFEAGELGPGTIVGSASFNLLVIGAICIYSIPD GEVRQIANLKVFAVTTFSCIFAYVWLTLVLLVITPGYVTLWEAIITFLMFPALIFVAYMADRDCCMKKVELEENGMVGIS LNDKEERRPALTKQESSGEGTIMKLAKELGHESFDQGLPEEEAAKIAAAKIQEHQHHDRLWYRINATRGVSGGKKLIPRV LTTFQKYNLIDTSYLGNIIFASKGEPNSVGLFLSFTVETINGTAVAPEDYIHLEEVIEFAANEQLRQLYIQIVDDNEWEP DEFFFVKLALTHDEETNESVVLGPVSISQITIINDDEPGKLEFAKPSIIAKESGRHVRIPVNRIHGADGHVSVKWRTKDI TAISGVDYEGGEGELKFDHGETTKNIDIHIHDTNKDERDESFEVELGETDGGAELAKIKKTIVTIVNDEEFNGLVSRIVN LTKANLDALQLEDSTWVSQFKTAMNVNGGDLETATFVDYILHFCTFFWKILFAFVPPPKYLGGWPAFILSLAVIGLMTAL IGDAASIFGCLIGLKDSITAISIVALGTSMPDTFASKTAAVNEKTADSSIGNINGSNSVNVFLGLGLSWLIATIYHLVKT GSDFEVPAKTLAFSVVLYTVAAIVAIVLLVLRRTLPIFGNAELGGPKVPKIFCSIIFFSLWLFYLLMSILKAYDIITVNI |
|